ACCESS Software Discovery
CAFE Phylogenetics Tutorial
CAFE (Computational Analysis of gene Family Evolution) is an application that analyzes changes in gene family size in a way that accounts for phylogenetic history and provides a statistical foundation for evolutionary inferences. This image includes a tutorial for a full CAFE pipeline including the applications CAFE, BLAST, MCL and r8s.Related Jetstream resources:
- View in source catalog: https://use.jetstream-cloud.org/application/images/651
- Access source catalog: https://use.jetstream-cloud.org/application/images/search
- Quick Start Guide: https://wiki.jetstream-cloud.org/Quick+Start+Guide
- Introduction Workshop: https://cvw.cac.cornell.edu/jetstream/
| Keywords | bioinformatics |
| Quality Level | Production |
| Audience | xsede.org |
| Provided By | urn:ogf:glue2:info.xsede.org:resource:rdr:resource.organizations:561 |
| Hosted On | urn:ogf:glue2:info.xsede.org:resource:rdr:resource.base:68 |
| Supported By | XSEDE Help Desk (unavailable) |
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ACCESS is an advanced computing and data resource supported by the
National Science Foundation
and made possible through these lead institutions and their partners:
Carnegie Mellon University,
University of Colorado Boulder,
University of Illinois at Urbana-Champaign, and
State University of New York at Buffalo .
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