ACCESS Software Discovery
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| Photoscan_Centos7 Cloud Image Indiana U Centos7 GUI development with Agisoft's photoscan preinstalled and configuredRelated Jetstream resources:
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| bcbio-nextgen Cloud Image Indiana U Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis. You write a high level configuration file specifying your inputs and analysis parameters. This input drives a parallel run that handles distributed execution, idempotent processing restarts and safe transactional steps. bcbio provides a shared community resource that handles the data processing component of sequencing analysis, providing researchers with more time to focus on the downstream biology.Related Jetstream resources:
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| VJC_R341_Bioc3_6_HSOS_admDec28 Cloud Image Indiana U updates Bioc packages and includes HSOS infrastructure of Dec 2017Related Jetstream resources:
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| pna-agent-tacc Cloud Image Indiana U Anaconda python 3.6, OpenMMRelated Jetstream resources:
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| VJC_R3_4_1_BiocHSOS_HDFS v_1_1 Cloud Image Indiana U Adding infrastructure to support running hdf server.Related Jetstream resources:
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| VJC_R3.4.1_BiocHSOS v.1.1 Cloud Image Indiana U Includes sufficient infrastructure to run rhdf5client + HSOSRelated Jetstream resources:
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| VJC_R3.4.1_Bioconductor Cloud Image Indiana U Includes sufficient infrastructure to run rhdf5clientRelated Jetstream resources:
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| Globus Toolkit GridFTP Service Vendor Software Globus Toolkit GridFTP Services
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| Information Services Vendor Software XSEDE XSEDE Information Services (IS)
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| Kerberos Vendor Software Kerberos is a network authentication protocol. It is designed to provide strong authentication for client/server applications by using secret-key cryptography. A free implementation of this protocol is available from the Massachusetts Institute of Technology. Kerberos is available in many commercial products as well.
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| MyProxy Vendor Software NCSA MyProxy is open source software for managing X.509 Public Key Infrastructure (PKI) security credentials (certificates and private keys). MyProxy combines an online credential repository with an online certificate authority to allow users to securely obtain credentials when and where needed. Users run myproxy-logon to authenticate and obtain credentials, including trusted CA certificates and Certificate Revocation Lists (CRLs). Storing credentials in a MyProxy repository allows users to easily obtain RFC 3820 proxy credentials, without worrying about managing private key and certificate files. They can use MyProxy to delegate credentials to services acting on their behalf (like a grid portal) by storing credentials in the MyProxy repository and sending the MyProxy passphrase to the service. They can also use MyProxy to renew their credentials, so, for example, long-running jobs don't fail because of expired credentials. A professionally managed MyProxy server can provide a more secure storage location for private keys than typical end-user systems. MyProxy can be configured to encrypt all private keys in the repository with user-chosen passphrases, with server-enforced policies for passphrase quality. By using a proxy credential delegation protocol, MyProxy allows users to obtain proxy credentials when needed without ever transferring private keys over the network. For users that don't already have PKI credentials, the MyProxy Certificate Authority (CA) provides a convenient method for obtaining them. The MyProxy CA issues short-lived session credentials to authenticated users. The repository and CA functionality can be combined in one service or can be used separately. MyProxy provides a set of flexible authentication and authorization mechanisms for controlling access to credentials. Server-wide policies allow the MyProxy administrator to control how credentials may be used. Per-credential policies provide additional controls for credential owners. MyProxy supports multiple authentication mechanisms, including passphrase, certificate, Kerberos, OAuth, SAML, OpenID, Pubcookie, VOMS, PAM, LDAP, RADIUS, SASL, Moonshot, and One Time Passwords (OTP).
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| UIUC Research Information Technology (IT) Portal Vendor Software Portal for finding University of Illinois campus wide technology resources & training
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| COmanage Vendor Software Most academic and research success stories involve a considerable amount of collaboration. COmanage helps you streamline and manage your identity-oriented requirements so your faculty can concentrate on research, your students can concentrate on learning, and your staff can concentrate on getting things done.
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| Globus Connect Personal Vendor Software Creates a Globus endpoint on your laptop or other personal computer and allows you to transfer and share files, even if you don't have administrative privileges on your machine. Globus Connect Personal is available for Mac OS X, Windows, and Linux operating systems.
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| Resource Description Repository (RDR) Online Service XSEDE's Resource Description Repository web application
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| OSG GSI OpenSSH login service Online Service OSG OSG login node
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| Globus Auth ID Explorer Online Service Tool that enables developers and service operators to see Globus Auth API OIDC and OAuth2 application visible data for authenticated users.
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| Amber Executable Software SEAGrid Amber |
| CP2K Executable Software SEAGrid CP2K |
| Abaqus Executable Software SEAGrid Abaqus |
| PSI4 Executable Software SEAGrid PSI4 |
| Gaussian16 Executable Software SEAGrid Gaussian 16 |
| Service Provider Mass Storage Systems Online Service Some XSEDE Service Providers (SPs) offer mass storage systems. These systems provide orders of magnitude more data storage than personal or (most) academic departmental storage systems and are intended to facilitate high-end scientific computing and data analysis activities. These mass storage systems are nearly always accessible via the command-line interface offered by the SP's computation resources. Some SPs also offer other interfaces to their mass storage systems (e.g., GridFTP, Globus, and similar network interfaces).
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| Singularity Container Collaboration and Registry Online Service Online Singularity Container Collaboration Services and Registry
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| Research Software Portal Manual Software and Services Registration Forms Online Service The Research Software Portal enables software developers, resource and digital service operators, and infrastructure integrators to manually register using web forms vendor software, operational deployment of software, and packaged software. By registering software and advanced digital services users can discover and use that softgware.
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ACCESS is an advanced computing and data resource supported by the
National Science Foundation
and made possible through these lead institutions and their partners:
Carnegie Mellon University,
University of Colorado Boulder,
University of Illinois at Urbana-Champaign, and
State University of New York at Buffalo .
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