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L1-3 SP Operational Components

Services

Interface NameInterface VersionResource IDService TypeURLQuality LevelServing StateCreation Time
gridftp-default-server6.0.1grid1.osg.xsede.orgStorageServicegsiftp://submit-1.osg.xsede.org:2811/productionproduction2018-02-24T15:22:48Z
org.globus.gram5.0.4-r1supermic.cct-lsu.xsede.orgComputingServicesmic1.hpc.lsu.edu:2119/productionproduction2018-02-24T15:17:00Z
org.globus.gram5.2.3stampede.tacc.xsede.orgComputingServicelogin5.stampede.tacc.utexas.edu:2119/jobmanager-slurmproductionproduction2018-01-29T21:49:37Z
org.globus.gridftp12.1xstream.stanford.xsede.orgStorageServicegsiftp://xstream.stanford.xsede.org:2811/productionproduction2018-02-24T15:11:46Z
org.globus.gridftp12.3bridges.psc.xsede.orgStorageServicegsiftp://gridftp.bridges.psc.edu:2811/productionproduction2018-02-24T15:39:19Z
org.globus.gridftp6.0.1maverick.tacc.xsede.orgStorageServicegsiftp://gridftp.stampede2.tacc.xsede.org:2811/productionproduction2018-02-24T15:08:52Z
org.globus.gridftp6.0.1stampede.tacc.xsede.orgStorageServicegsiftp://gridftp.stampede.tacc.xsede.org:2811/productionproduction2018-01-29T21:49:37Z
org.globus.gridftp6.0.1stampede2.tacc.xsede.orgStorageServicegsiftp://gridftp.stampede2.tacc.xsede.org:2811/productionproduction2018-02-24T15:08:05Z
org.globus.gridftp6.0.1supermic.cct-lsu.xsede.orgStorageServicegsiftp://smic1.hpc.lsu.edu:2811/productionproduction2018-02-24T15:17:00Z
org.globus.gridftp6.0.1wrangler.tacc.xsede.orgStorageServicegsiftp://gridftp1.wrangler.tacc.utexas.edu:2811/productionproduction2018-02-24T15:44:35Z
org.globus.gridftp6.38comet.sdsc.xsede.orgStorageServicegsiftp://oasis-dm.sdsc.xsede.org:2811productionproduction2018-02-24T15:03:01Z
org.globus.openssh5.9p1-hpn13v11comet.sdsc.xsede.orgLoginServicecomet.sdsc.xsede.org:22productionproduction2018-02-24T15:03:01Z
org.globus.openssh7.1p2grid1.osg.xsede.orgLoginServicesubmit-1.osg.xsede.org:22productionproduction2018-02-24T15:22:48Z
org.globus.openssh7.1p2stampede.tacc.xsede.orgLoginServicestampede.tacc.xsede.org:2222productionproduction2018-01-29T21:49:37Z
org.globus.openssh7.1p2stampede2.tacc.xsede.orgLoginServicestampede2.tacc.xsede.org:2222productionproduction2018-02-24T15:08:05Z
org.globus.openssh7.1p2csupermic.cct-lsu.xsede.orgLoginServicesupermic.cct-lsu.xsede.org:2222productionproduction2018-02-24T15:17:00Z
org.globus.openssh7.5p1bbridges.psc.xsede.orgLoginServicebridges.psc.edu:2222productionproduction2018-02-24T15:39:19Z
org.globus.openssh7.5p1bmaverick.tacc.xsede.orgLoginServicemaverick.tacc.xsede.org:2222productionproduction2018-02-24T15:08:52Z
org.globus.openssh7.5p1bwrangler.tacc.xsede.orgLoginServicewrangler.tacc.xsede.org:2222productionproduction2018-02-24T15:44:35Z
org.globus.openssh7.5p1bxstream.stanford.xsede.orgLoginServicexstream.stanford.xsede.org:2222productionproduction2018-02-24T15:11:46Z
org.xsede.mds-stopgap1.2supermic.cct-lsu.xsede.orgInformationServicesupermic.cct-lsu.xsede.orgproductionproduction2018-02-24T15:17:00Z

Software

App NameApp VersionResource IDDescriptionCreation Time
.1.8.1INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
.2.1INTEL-15.0.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
.2.10b2INTEL-14.0.2-ibverbssupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
.2.10b2INTEL-14.0.2-ibverbs-micsupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
.6.5INTEL-140-OPENMPI-1.8.1supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
.gnuatlas/3.10.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnuboost/1.55.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnufftw/2.1.5comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnufftw/3.3.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnugsl/1.16comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnugsl/2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnuhdf4/2.11comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnuhdf5/1.8.14comet.sdsc.xsede.orgmust specify one of the following mpi modules: mvapich2_ib openmpi_ib2018-02-24T15:01:01Z
.gnulapack/3.6.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnumvapich2_gdr/2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnumvapich2_gdr/2.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnumvapich2_ib/2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnunetcdf/3.6.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnunetcdf/4.3.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnuopenmpi_ib/1.8.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnup3dfft/2.7.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnuparmetis/4.0.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnupetsc/3.6.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnuscalapack/2.0.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnuslepc/3.6.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnusprng/2.0bcomet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnusundials/2.6.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnusuperlu/4.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.gnutrilinos/11.12.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgifftw/2.1.5comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgifftw/3.3.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgigsl/1.16comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgigsl/2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgihdf4/2.11comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgihdf5/1.8.14comet.sdsc.xsede.orgmust specify one of the following mpi modules: mvapich2_ib openmpi_ib2018-02-24T15:01:01Z
.pgilapack/3.6.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgimvapich2_gdr/2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgimvapich2_gdr/2.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgimvapich2_ib/2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pginetcdf/3.6.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pginetcdf/4.3.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgiopenmpi_ib/1.8.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgip3dfft/2.7.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgiparmetis/4.0.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgipetsc/3.6.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgiscalapack/2.0.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgislepc/3.6.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgisprng/2.0bcomet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgisundials/2.6.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.pgisuperlu/4.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
.trunk-462INTEL-140-OPENMPI-1.8.4supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
0.1.19INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
0.2.8INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
0.35INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
0.7.4INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
0.9.10impi-4.1.3.048-intel64supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
0.9.10impi-4.1.3.048-intel64-micsupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
0.9.10mvapich2-2.0-INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.0.0INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.0.3INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.0.3INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.1.1INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.1.1INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.10.0INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.10.0INTEL-14.0.2-micsupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.16INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.2.10INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.5.2INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.55.0INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.55.0INTEL-14.0.2-micsupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.8.12INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.8.17INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.8.4INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1.9.0INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
14INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
16INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
1Feb14INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.0INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.0.2INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.0.2INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.0bINTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.1GCC-4.9.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.1.0INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.1.0INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.10INTEL-14.0.2-ibverbssupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.10INTEL-14.0.2-ibverbs-micsupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.2.28INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.2.31INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.23.2INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.3.0INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.3.1INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.5.2GCC-4.9.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.7.7GCC-4.9.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.8.0bINTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2.8.12INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2017.3.196intel64supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
2018.0.128intel64supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
21Jan15INTEL-14.0.2-impi-4.1.3.048-micsupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.0.3INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.1.0INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.1.0INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.1.1INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.1b1INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.2INTEL-140-OPENMPI-1.8.4supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.2.0INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.23INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.3.3INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.3.6INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.4.2INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.5.0-realINTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.8.2INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
3.9.0GCC-4.9.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
4.0rc4GCC-4.9.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
4.1.3.048intel64supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
4.10.0INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
4.2INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
4.2.1.1INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
4.3.1GCC-4.9.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
4.3.1INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
5.0INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
5.0.1.035intel64supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
5.0.7INTEL-140-OPENMPI-1.8.4supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
5.1.0INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
5.1.2INTEL-140-OPENMPI-1.8.4supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
5.1.4INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
5.16.3INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
5.2.1INTEL-14.0.2-mvapich-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
6.3INTEL-140-MVAPICH2-2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
8.36INTEL-14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
AIPS31DEC16bridges.psc.xsede.org2018-02-24T15:02:11Z
Abinit7.10.5bridges.psc.xsede.org2018-02-24T15:02:11Z
Abinit8.0.8bbridges.psc.xsede.org2018-02-24T15:02:11Z
Abinit8.4.3bridges.psc.xsede.org2018-02-24T15:02:11Z
BerkeleyGW1.2.0bridges.psc.xsede.org2018-02-24T15:02:11Z
Bison3.0.4xstream.stanford.xsede.org2018-02-24T15:09:06Z
CFITSIO3380bridges.psc.xsede.org2018-02-24T15:02:11Z
CP2K4.1bridges.psc.xsede.org2018-02-24T15:02:11Z
CUDA6.5.14xstream.stanford.xsede.org2018-02-24T15:09:06Z
CUDA7.0.28xstream.stanford.xsede.org2018-02-24T15:09:06Z
CUDA7.5.18xstream.stanford.xsede.org2018-02-24T15:09:06Z
CUDA8.0.44xstream.stanford.xsede.org2018-02-24T15:09:06Z
CUDA8.0.61xstream.stanford.xsede.org2018-02-24T15:09:06Z
CUDAdefaultxstream.stanford.xsede.org2018-02-24T15:09:06Z
CUE1.1test1.test.xsede.org2018-02-24T11:50:33Z
EasyBuild1.11.1supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
EasyBuild1.13.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
EasyBuild2.3.0xstream.stanford.xsede.org2018-02-24T15:09:06Z
EasyBuild2.6.0xstream.stanford.xsede.org2018-02-24T15:09:06Z
EasyBuild3.4.0xstream.stanford.xsede.org2018-02-24T15:09:06Z
Elemental0.85-HybridDebugstampede.tacc.xsede.orgLibrary for distributed dense linear algebra2018-01-29T21:56:50Z
Elemental0.85-HybridReleasestampede.tacc.xsede.orgLibrary for distributed dense linear algebra2018-01-29T21:56:50Z
Elemental0.85-PureDebugstampede.tacc.xsede.orgLibrary for distributed dense linear algebra2018-01-29T21:56:50Z
Elemental0.85-PureReleasestampede.tacc.xsede.orgLibrary for distributed dense linear algebra2018-01-29T21:56:50Z
GCC4.9.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
GCC4.9.2-binutils-2.25xstream.stanford.xsede.org2018-02-24T15:09:06Z
GNU4.9.2-2.25xstream.stanford.xsede.org2018-02-24T15:09:06Z
GPAW1.2.0bridges.psc.xsede.org2018-02-24T15:02:11Z
GenomeAnalysisTK3.5comet.sdsc.xsede.org2018-02-24T15:01:01Z
GenomeAnalysisTK3.6comet.sdsc.xsede.org2018-02-24T15:01:01Z
INTEL14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
INTEL15.0.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
INTEL-140-MPICH3.1.1supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
INTEL-140-MVAPICH22.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
JUnit4.11-Java-1.7.0_80xstream.stanford.xsede.org2018-02-24T15:09:06Z
JUnit4.11-Java-1.8.0_74xstream.stanford.xsede.org2018-02-24T15:09:06Z
Java1.7.0_80xstream.stanford.xsede.org2018-02-24T15:09:06Z
Java1.8.0_121xstream.stanford.xsede.org2018-02-24T15:09:06Z
Java1.8.0_74xstream.stanford.xsede.org2018-02-24T15:09:06Z
LAMMPSr14624bridges.psc.xsede.org2018-02-24T15:02:12Z
LAMMPSr15297bridges.psc.xsede.org2018-02-24T15:02:12Z
M41.4.17xstream.stanford.xsede.org2018-02-24T15:09:06Z
MAST2.0.0stampede.tacc.xsede.orgMAST - MAterials Simulation Toolkit2018-01-29T21:56:50Z
MAST2.0.0stampede2.tacc.xsede.orgMAST - MAterials Simulation Toolkit, Community Supported Software2018-02-24T15:09:22Z
Magma2.0.1bridges.psc.xsede.org2018-02-24T15:02:12Z
Maven3.3.9xstream.stanford.xsede.org2018-02-24T15:09:06Z
PGI17.4-GNU-4.9.2-2.25xstream.stanford.xsede.org2018-02-24T15:09:06Z
Platypus0.5.2stampede.tacc.xsede.org2018-01-29T21:56:51Z
PrgEnv-cray1.0.0xstream.stanford.xsede.org2018-02-24T15:09:06Z
QuantumEspresso5.3.0bridges.psc.xsede.org2018-02-24T15:02:12Z
QuantumEspresso5.4.0bridges.psc.xsede.org2018-02-24T15:02:12Z
QuantumEspresso6.0.0bridges.psc.xsede.org2018-02-24T15:02:12Z
R2.15.1stampede.tacc.xsede.orgstatistics package2018-01-29T21:56:51Z
R3.2.3-mklbridges.psc.xsede.org2018-02-24T15:02:12Z
R3.3.1-mklbridges.psc.xsede.org2018-02-24T15:02:12Z
R3.3.3-mklbridges.psc.xsede.org2018-02-24T15:02:12Z
R3.4.0comet.sdsc.xsede.orgNo supported MPI flavor found No supported network found2018-02-24T15:01:01Z
R3.4.1-mklbridges.psc.xsede.org2018-02-24T15:02:12Z
Rstats3.0.3maverick.tacc.xsede.orgstatistics package2018-02-24T15:15:30Z
Rstats3.2.1stampede.tacc.xsede.orgstatistics package2018-01-29T21:56:50Z
Rstats3.2.1wrangler.tacc.xsede.org2018-02-24T14:49:23Z
Rstats3.4.0stampede2.tacc.xsede.org2018-02-24T15:09:22Z
Rstats3.4.0wrangler.tacc.xsede.org2018-02-24T14:49:23Z
RstatsPackages3.2.1wrangler.tacc.xsede.org2018-02-24T14:49:23Z
RstatsPackages3.4.0stampede2.tacc.xsede.org2018-02-24T15:09:22Z
RstatsPackages3.4.0wrangler.tacc.xsede.org2018-02-24T14:49:23Z
Rstudio0.98.501maverick.tacc.xsede.orgPowerful IDE for R2018-02-24T15:15:30Z
Rstudio0.98.501stampede.tacc.xsede.orgPowerful IDE for R2018-01-29T21:56:51Z
Rstudio0.99.473wrangler.tacc.xsede.orgPowerful IDE for R2018-02-24T14:49:23Z
Rstudio0.99.903stampede.tacc.xsede.orgPowerful IDE for R2018-01-29T21:56:51Z
Rstudio0.99.903wrangler.tacc.xsede.orgPowerful IDE for R2018-02-24T14:49:23Z
Rstudio1.0.153maverick.tacc.xsede.orgPowerful IDE for R2018-02-24T15:15:30Z
Rstudio1.0.153stampede2.tacc.xsede.orgPowerful IDE for R2018-02-24T15:09:22Z
Rstudio1.0.153wrangler.tacc.xsede.orgPowerful IDE for R2018-02-24T14:49:23Z
SOAPsnp1.03comet.sdsc.xsede.org2018-02-24T15:01:01Z
Siesta4.0b-485bridges.psc.xsede.org2018-02-24T15:02:12Z
Singular4.1.0bridges.psc.xsede.org2018-02-24T15:02:12Z
Trilinos12.12bridges.psc.xsede.org2018-02-24T15:02:12Z
ViennaRNA2.2.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
abaqus2016bridges.psc.xsede.org2018-02-24T15:02:11Z
abaqus2017bridges.psc.xsede.org2018-02-24T15:02:11Z
abaqus6.11-2comet.sdsc.xsede.org2018-02-24T15:01:01Z
abaqus6.14-1comet.sdsc.xsede.org2018-02-24T15:01:01Z
abinit8.4.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
abyss1.5.2bridges.psc.xsede.orgABySS is a de novo sequence assembler intended for short paired-end reads and large genomes.2018-02-24T15:02:11Z
abyss1.9.0bridges.psc.xsede.orgABySS is a de novo sequence assembler intended for short paired-end reads and large genomes.2018-02-24T15:02:11Z
abyss2.0.2bridges.psc.xsede.orgABySS is a de novo sequence assembler intended for short paired-end reads and large genomes.2018-02-24T15:02:11Z
abyss2.0.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
advisor18.1.0stampede2.tacc.xsede.orgIntel Advisor2018-02-24T15:09:22Z
allinea6.0.6xstream.stanford.xsede.orgAllinea Forge is the development tool suite C++ and Fortran high performance codes on Linux.2018-02-24T15:09:07Z
allpaths-lg52488bridges.psc.xsede.orgA short read assembler.2018-02-24T15:02:11Z
allpathslg48777stampede.tacc.xsede.orgALLPATHS-LG - Broad Institute assembler for complex eukaryote genomes2018-01-29T21:56:50Z
allpathslg52488stampede.tacc.xsede.orgALLPATHS-LG - Broad Institute assembler for complex eukaryote genomes2018-01-29T21:56:50Z
amask1.0stampede2.tacc.xsede.org2018-02-24T15:09:22Z
amber16comet.sdsc.xsede.org2018-02-24T15:01:01Z
ambertools16xstream.stanford.xsede.orgThe Amber Molecular Dynamics Package (intel/2015.5.223 Python/2.7.10)2018-02-24T15:09:07Z
amira6.0.1maverick.tacc.xsede.orga visualization platform for biomedical data2018-02-24T15:15:30Z
amos3.1.0stampede.tacc.xsede.orgAMOS - A Modular, Open-Source whole genome assembler2018-01-29T21:56:51Z
anaconda4.0bridges.psc.xsede.org2018-02-24T15:02:11Z
anaconda4.2.0-3.5.2bridges.psc.xsede.org2018-02-24T15:02:11Z
anaconda55.0.0-3.6bridges.psc.xsede.org2018-02-24T15:02:11Z
annovar2016.02.01bridges.psc.xsede.org2018-02-24T15:02:11Z
ansys15.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
ansys16.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
ansys17.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
ansys17.1bridges.psc.xsede.orgANSYS is a general purpose finite element modeling package. It includes ANSYS Multiphysics and Fluent.2018-02-24T15:02:11Z
ansys18.1supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
ansys18.2bridges.psc.xsede.org2018-02-24T15:02:11Z
ant1.9.3-Java-1.7.0_80xstream.stanford.xsede.org2018-02-24T15:09:06Z
ant1.9.4supermic.cct-lsu.xsede.orgApache Ant is a Java library and command-line tool whose mission is to drive processes described in build files as targets and extension points dependent upon each other. The main known usage of Ant is the build of Java applications.2018-02-24T15:22:56Z
ant1.9.6-Java-1.8.0_74xstream.stanford.xsede.org2018-02-24T15:09:06Z
anvio2.0.2bridges.psc.xsede.orgAnvi'o is an analysis and visualization platform for 'omics data.2018-02-24T15:02:11Z
anvio2.2.2bridges.psc.xsede.orgAnvi'o is an analysis and visualization platform for 'omics data.2018-02-24T15:02:11Z
anvio2.3.1bridges.psc.xsede.orgAnvi'o is an analysis and visualization platform for 'omics data.2018-02-24T15:02:11Z
anvio2.3.2bridges.psc.xsede.orgAnvi'o is an analysis and visualization platform for 'omics data.2018-02-24T15:02:11Z
anvio2.4.0bridges.psc.xsede.orgAnvi'o is an analysis and visualization platform for 'omics data.2018-02-24T15:02:11Z
anvio3bridges.psc.xsede.orgAnvi'o is an analysis and visualization platform for 'omics data.2018-02-24T15:02:11Z
apache-maven3.2.2wrangler.tacc.xsede.org2018-02-24T14:49:23Z
apbs1.5comet.sdsc.xsede.org2018-02-24T15:01:01Z
aragorn1.2.38bridges.psc.xsede.orgARAGORN detects tRNA, mtRNA, and tmRNA genes.2018-02-24T15:02:11Z
arpack3.1.4stampede.tacc.xsede.orgeigenvalue computations based on restarted Arnoldi method2018-01-29T21:56:50Z
arpack3.1.4stampede2.tacc.xsede.orgeigenvalue computations based on restarted Arnoldi method2018-02-24T15:09:22Z
aspera3.6.2bridges.psc.xsede.org2018-02-24T15:02:11Z
aspera-connect3.6.1.110647stampede.tacc.xsede.orgAspera Connect client2018-01-29T21:56:51Z
aspera-connect3.6.1.110647stampede2.tacc.xsede.orgAspera Connect client2018-02-24T15:09:22Z
aspera-connect3.6.1.110647wrangler.tacc.xsede.orgAspera Connect client2018-02-24T14:49:23Z
atlas3.10.2bridges.psc.xsede.org2018-02-24T15:02:11Z
atlas3.10.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
augustus3.2.2bridges.psc.xsede.org2018-02-24T15:02:11Z
autodock4.2.5.1stampede.tacc.xsede.orgautodock - a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure.2018-01-29T21:56:51Z
autodock4.2.6bridges.psc.xsede.org2018-02-24T15:02:11Z
autodock_vina1.1.2stampede.tacc.xsede.orgOpen-source program for drug discovery, molecular docking and virtual screening, offering multi-core capability, high performance and enhanced accuracy and ease of use.2018-01-29T21:56:50Z
autodock_vina1.1.2stampede2.tacc.xsede.orgAutoDock Vina is an open-source program for doing molecular docking2018-02-24T15:09:22Z
autotools1.0maverick.tacc.xsede.orgDeveloper utilities2018-02-24T15:15:30Z
autotools1.0stampede.tacc.xsede.orgDeveloper utilities2018-01-29T21:56:50Z
autotools1.1stampede.tacc.xsede.orgDeveloper utilities2018-01-29T21:56:50Z
autotools1.1stampede2.tacc.xsede.org2018-02-24T15:09:22Z
autotools1.1wrangler.tacc.xsede.orgDeveloper utilities2018-02-24T14:49:23Z
bamtools2.4.0bridges.psc.xsede.org2018-02-24T15:02:11Z
bamtools2.4.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
barrnap0.6bridges.psc.xsede.orgBarrnap predicts the location of ribosomal RNA genes in genomes.2018-02-24T15:02:11Z
basemap1.1.0stampede2.tacc.xsede.orgPlot 2D data on maps in Python2018-02-24T15:09:22Z
bazel0.2.0xstream.stanford.xsede.org2018-02-24T15:09:07Z
bazel0.3.1bridges.psc.xsede.org2018-02-24T15:02:11Z
bazel0.3.1xstream.stanford.xsede.org2018-02-24T15:09:07Z
bazel0.3.2bridges.psc.xsede.org2018-02-24T15:02:11Z
bazel0.4.1bridges.psc.xsede.org2018-02-24T15:02:11Z
bazel0.4.3xstream.stanford.xsede.org2018-02-24T15:09:07Z
bazel0.4.5bridges.psc.xsede.org2018-02-24T15:02:11Z
bazel0.4.5xstream.stanford.xsede.org2018-02-24T15:09:07Z
bazel0.5.1bridges.psc.xsede.org2018-02-24T15:02:11Z
bazel0.9.0bridges.psc.xsede.org2018-02-24T15:02:11Z
bazel0.9.0xstream.stanford.xsede.org2018-02-24T15:09:07Z
bbcp14.09.02.00.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
bbcp15.02.03supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
bbftp3.2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
bcftools0.1.19bridges.psc.xsede.orgUtilities for variant calling and manipulating VCFs and BCFs.2018-02-24T15:02:11Z
bcftools1.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
bcftools1.3.1bridges.psc.xsede.orgUtilities for variant calling and manipulating VCFs and BCFs.2018-02-24T15:02:11Z
beagle2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
beast1.7.5stampede.tacc.xsede.orgTool for Bayesian MCMC analysis of molecular sequences2018-01-29T21:56:50Z
beast1.7.5supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
beast1.8.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
beast1.8.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
beast1.8.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
beast22.1.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
bedops2.4.19bridges.psc.xsede.org2018-02-24T15:02:11Z
bedtools2.19.0stampede.tacc.xsede.orgbedtools: a flexible suite of utilities for comparing genomic features2018-01-29T21:56:50Z
bedtools2.22.1stampede.tacc.xsede.orgbedtools: a flexible suite of utilities for comparing genomic features2018-01-29T21:56:50Z
bedtools2.25.0bridges.psc.xsede.org2018-02-24T15:02:11Z
bedtools2.25.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
bedtools2.25.0stampede.tacc.xsede.orgbedtools: a flexible suite of utilities for comparing genomic features2018-01-29T21:56:50Z
bedtools2.25.0wrangler.tacc.xsede.orgbedtools: a flexible suite of utilities for comparing genomic features2018-02-24T14:49:23Z
bedtools2.26.0stampede2.tacc.xsede.orgA powerful toolset for genome arithmetic2018-02-24T15:09:22Z
bfast0.7.0astampede.tacc.xsede.orgBFAST: Blat-like Fast Accurate Search Tool2018-01-29T21:56:50Z
big-data-r3.2.1wrangler.tacc.xsede.orgbig data R packages2018-02-24T14:49:23Z
binutils2.25xstream.stanford.xsede.org2018-02-24T15:09:06Z
bioperl1.6.901stampede.tacc.xsede.orgBioPerl2018-01-29T21:56:51Z
biopython1.66comet.sdsc.xsede.org2018-02-24T15:01:01Z
biotools4comet.sdsc.xsede.org2018-02-24T15:01:01Z
bismark0.10.1stampede.tacc.xsede.orgbismark - A tool to map bisulfite converted sequence reads and determine cytosine2018-01-29T21:56:51Z
bismark0.14.5stampede.tacc.xsede.orgbismark - A tool to map bisulfite converted sequence reads and determine cytosine2018-01-29T21:56:51Z
bismark0.15.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
bismark0.18.1stampede2.tacc.xsede.orgBismark is a program to map bisulfite treated sequencing reads to a genome of interest and perform methylation calls in a single step2018-02-24T15:09:22Z
blasr1.3.1bridges.psc.xsede.org2018-02-24T15:02:11Z
blast2.2.22supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
blast2.2.28stampede.tacc.xsede.orgNCBI BLAST+ sequence alignment package. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.2018-01-29T21:56:51Z
blast2.2.29stampede.tacc.xsede.orgNCBI BLAST+ sequence alignment package. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.2018-01-29T21:56:51Z
blast2.2.31bridges.psc.xsede.orgBLAST is a search tool that finds regions of local similarity between nucleotide or protein sequences2018-02-24T15:02:11Z
blast2.3.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
blast2.6.0bridges.psc.xsede.orgBLAST is a search tool that finds regions of local similarity between nucleotide or protein sequences2018-02-24T15:02:11Z
blast2.6.0stampede2.tacc.xsede.orgNCBI BLAST+ sequence alignment package2018-02-24T15:09:22Z
blast2.7.1bridges.psc.xsede.orgBLAST is a search tool that finds regions of local similarity between nucleotide or protein sequences2018-02-24T15:02:11Z
blat35comet.sdsc.xsede.org2018-02-24T15:01:01Z
blat35stampede.tacc.xsede.orgBLAST like alignment tool2018-01-29T21:56:50Z
blatv35bridges.psc.xsede.org2018-02-24T15:02:11Z
blis0.1.8stampede.tacc.xsede.orgBLAS-like Library Instantiation Software2018-01-29T21:56:50Z
blis0.2.2astampede2.tacc.xsede.orgBLAS-like Library Instantiation Software2018-02-24T15:09:22Z
boost1.50.0bridges.psc.xsede.org2018-02-24T15:02:11Z
boost1.51.0maverick.tacc.xsede.orgBoost provides free peer-reviewed portable C++ source libraries.2018-02-24T15:15:30Z
boost1.55.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
boost1.55.0stampede.tacc.xsede.orgBoost provides free peer-reviewed portable C++ source libraries (Serial Version).2018-01-29T21:56:50Z
boost1.55.0wrangler.tacc.xsede.orgBoost provides free peer-reviewed portable C++ source libraries (Serial Version).2018-02-24T14:49:23Z
boost1.60.0bridges.psc.xsede.org2018-02-24T15:02:11Z
boost1.60.0_gnu_openmpibridges.psc.xsede.org2018-02-24T15:02:11Z
boost1.60.0_py2.7.11bridges.psc.xsede.org2018-02-24T15:02:11Z
boost1.61.0stampede.tacc.xsede.orgBoost provides free peer-reviewed portable C++ source libraries (Serial Version).2018-01-29T21:56:50Z
boost1.61.0_py2.7.11bridges.psc.xsede.org2018-02-24T15:02:11Z
boost1.63.0_py2.7.11bridges.psc.xsede.org2018-02-24T15:02:11Z
boost1.64stampede2.tacc.xsede.orgBoost provides free peer-reviewed portable C++ source libraries.2018-02-24T15:09:22Z
boost1.66.0_py2.7.14_gcc5bridges.psc.xsede.org2018-02-24T15:02:11Z
boost-mpi1.55.0stampede.tacc.xsede.orgBoost provides free peer-reviewed portable C++ source libraries (Parallel Version).2018-01-29T21:56:50Z
bowtie1.0.0stampede.tacc.xsede.orgUltrafast, memory-efficient short read aligner2018-01-29T21:56:51Z
bowtie1.1.1bridges.psc.xsede.orgA sequence aligner for short reads.2018-02-24T15:02:11Z
bowtie1.1.1stampede.tacc.xsede.orgUltrafast, memory-efficient short read aligner2018-01-29T21:56:51Z
bowtie1.1.2bridges.psc.xsede.orgA sequence aligner for short reads.2018-02-24T15:02:11Z
bowtie1.1.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
bowtie1.2.1.1stampede2.tacc.xsede.orgMemory-efficient short read (NGS) aligner2018-02-24T15:09:22Z
bowtie2.1.0stampede.tacc.xsede.orgUltrafast, memory-efficient short read aligner2018-01-29T21:56:51Z
bowtie2.2.0stampede.tacc.xsede.orgUltrafast, memory-efficient short read aligner2018-01-29T21:56:51Z
bowtie2.2.5stampede.tacc.xsede.orgUltrafast, memory-efficient short read aligner2018-01-29T21:56:51Z
bowtie2.3.2stampede2.tacc.xsede.orgMemory-efficient short read (NGS) aligner2018-02-24T15:09:22Z
bowtie2.3.4wrangler.tacc.xsede.orgMemory-efficient short read (NGS) aligner2018-02-24T14:49:23Z
bowtie22.2.7bridges.psc.xsede.orgA tool for aligning sequence reads to long reference sequences.2018-02-24T15:02:11Z
bowtie22.2.7comet.sdsc.xsede.org2018-02-24T15:01:01Z
bsmap2.87.0p1stampede.tacc.xsede.orgBSMAP - short reads mapping software for bisulfite sequencing reads2018-01-29T21:56:51Z
bsmap2.91stampede.tacc.xsede.orgBSMAP - short reads mapping software for bisulfite sequencing reads2018-01-29T21:56:51Z
bsmap2.91wrangler.tacc.xsede.orgBSMAP - short reads mapping software for bisulfite sequencing reads2018-02-24T14:49:23Z
bsmap2.92stampede2.tacc.xsede.orgBSMAP for Methylation2018-02-24T15:09:22Z
busco1.22bridges.psc.xsede.org2018-02-24T15:02:11Z
bwa0.7.12stampede.tacc.xsede.orgBurrows-Wheeler Alignment Tool2018-01-29T21:56:50Z
bwa0.7.13bridges.psc.xsede.org2018-02-24T15:02:11Z
bwa0.7.13comet.sdsc.xsede.org2018-02-24T15:01:01Z
bwa0.7.16astampede2.tacc.xsede.orgBurrow-Wheeler Aligner for pairwise alignment between DNA sequences2018-02-24T15:09:22Z
bwa0.7.7stampede.tacc.xsede.orgbwa - Burrows-Wheeler Alignment Tool2018-01-29T21:56:50Z
bx-python0.7.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
caffe1.0.3stampede2.tacc.xsede.org2018-02-24T15:09:22Z
caffegit_2c34393fbridges.psc.xsede.org2018-02-24T15:02:11Z
caffegit_be163be0bridges.psc.xsede.org2018-02-24T15:02:11Z
caffegit_erictzeng_5ca549ce2bridges.psc.xsede.org2018-02-24T15:02:11Z
caffegit_master_HEADbridges.psc.xsede.org2018-02-24T15:02:11Z
caffe20.7.0bridges.psc.xsede.org2018-02-24T15:02:11Z
caffe2git_master_HEADbridges.psc.xsede.org2018-02-24T15:02:11Z
canu1.3bridges.psc.xsede.org2018-02-24T15:02:11Z
canu1.5bridges.psc.xsede.org2018-02-24T15:02:11Z
canu1.6bridges.psc.xsede.org2018-02-24T15:02:11Z
cce8.3.10xstream.stanford.xsede.org2018-02-24T15:09:07Z
cctools5.4.19xstream.stanford.xsede.orgThe Cooperative Computing Tools (cctools) contains Parrot, Chirp, Makeflow, Work Queue, SAND, and other software.2018-02-24T15:09:07Z
cd-hit2016.06.21bridges.psc.xsede.org2018-02-24T15:02:11Z
cd-hit4.6.4stampede.tacc.xsede.orgClustering DNA/protein sequence database at high identity with tolerance.2018-01-29T21:56:50Z
cd-hit4.6.4wrangler.tacc.xsede.orgClustering DNA/protein sequence database at high identity with tolerance.2018-02-24T14:49:23Z
cdbfasta2013bridges.psc.xsede.org2018-02-24T15:02:11Z
celera8.3rc2comet.sdsc.xsede.org2018-02-24T15:01:01Z
centrifuge1.0.3-betabridges.psc.xsede.orgClassifier for metagenomic sequences2018-02-24T15:02:11Z
cfourv1bridges.psc.xsede.org2018-02-24T15:02:11Z
chainer1.24.0bridges.psc.xsede.org2018-02-24T15:02:11Z
charmmMPIbridges.psc.xsede.org2018-02-24T15:02:11Z
checkm1.0.7bridges.psc.xsede.orgA set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes.2018-02-24T15:02:11Z
cilk5.4.6comet.sdsc.xsede.org2018-02-24T15:01:01Z
circos0.69.2bridges.psc.xsede.orgA package for visualizing data in a circular layout. Commonly used to visualize genome data.2018-02-24T15:02:11Z
cmake2.8.12.2maverick.tacc.xsede.orgtool for generation of files from source2018-02-24T15:15:30Z
cmake2.8.9stampede.tacc.xsede.orgtool for generation of files from source2018-01-29T21:56:50Z
cmake3.1.0stampede.tacc.xsede.orgtool for generation of files from source2018-01-29T21:56:50Z
cmake3.10.2stampede2.tacc.xsede.orgtool for generation of files from source2018-02-24T15:09:22Z
cmake3.10.2wrangler.tacc.xsede.orgtool for generation of files from source2018-02-24T14:49:23Z
cmake3.5.2bridges.psc.xsede.org2018-02-24T15:02:11Z
cmake3.6.0wrangler.tacc.xsede.orgtool for generation of files from source2018-02-24T14:49:23Z
cmake3.7.1maverick.tacc.xsede.orgtool for generation of files from source2018-02-24T15:15:30Z
cmake3.7.1stampede.tacc.xsede.orgtool for generation of files from source2018-01-29T21:56:50Z
cmake3.7.1stampede2.tacc.xsede.orgtool for generation of files from source2018-02-24T15:09:22Z
cmake3.7.1wrangler.tacc.xsede.orgtool for generation of files from source2018-02-24T14:49:23Z
cmake3.7.2bridges.psc.xsede.org2018-02-24T15:02:11Z
cmake3.8.2stampede2.tacc.xsede.orgtool for generation of files from source2018-02-24T15:09:22Z
cmake3.9.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
condor8.0.4stampede.tacc.xsede.orgCondor for ligo.2018-01-29T21:56:50Z
cp2k2.5.1stampede.tacc.xsede.orgOpen source Ab Initio Molecular Dynamics software2018-01-29T21:56:50Z
cp2k4.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
cpmd3.17.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
cray-libsci13.0.3xstream.stanford.xsede.org2018-02-24T15:09:07Z
cray-libsci_acc3.1.2xstream.stanford.xsede.org2018-02-24T15:09:07Z
craype2.3.0xstream.stanford.xsede.org2018-02-24T15:09:06Z
craypkg-gen1.1.2xstream.stanford.xsede.org2018-02-24T15:09:07Z
cuDNN3.0xstream.stanford.xsede.org2018-02-24T15:09:06Z
cuDNN4.0xstream.stanford.xsede.org2018-02-24T15:09:06Z
cuDNN5.0-CUDA-7.5.18xstream.stanford.xsede.org2018-02-24T15:09:06Z
cuDNN5.0-rcxstream.stanford.xsede.org2018-02-24T15:09:06Z
cuDNN5.1-CUDA-7.5.18xstream.stanford.xsede.org2018-02-24T15:09:06Z
cuDNN5.1-CUDA-8.0.44xstream.stanford.xsede.org2018-02-24T15:09:06Z
cuDNN6.0-CUDA-8.0.61xstream.stanford.xsede.org2018-02-24T15:09:06Z
cuDNN7.0-CUDA-8.0.61xstream.stanford.xsede.org2018-02-24T15:09:06Z
cuDNNdefaultxstream.stanford.xsede.org2018-02-24T15:09:06Z
cube4.1.6stampede.tacc.xsede.orgperformance evaluation GUI for Scalasca profiler2018-01-29T21:56:51Z
cuda6.0stampede.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2018-01-29T21:56:50Z
cuda6.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
cuda6.5comet.sdsc.xsede.org2018-02-24T15:01:01Z
cuda6.5maverick.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2018-02-24T15:15:30Z
cuda6.5stampede.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2018-01-29T21:56:50Z
cuda6.5supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
cuda7.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
cuda7.0maverick.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2018-02-24T15:15:30Z
cuda7.0stampede.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2018-01-29T21:56:50Z
cuda7.5bridges.psc.xsede.org2018-02-24T15:02:11Z
cuda7.5maverick.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2018-02-24T15:15:30Z
cuda7.5stampede.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2018-01-29T21:56:50Z
cuda7.5supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
cuda8.0bridges.psc.xsede.org2018-02-24T15:02:11Z
cuda8.0maverick.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2018-02-24T15:15:30Z
cuda8.0stampede.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2018-01-29T21:56:50Z
cuda8.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
cuda8.0RCbridges.psc.xsede.org2018-02-24T15:02:11Z
cuda9.0bridges.psc.xsede.org2018-02-24T15:02:11Z
cuda9.0RCbridges.psc.xsede.org2018-02-24T15:02:11Z
cudatoolkit6.5.14xstream.stanford.xsede.org2018-02-24T15:09:07Z
cudnn4.0maverick.tacc.xsede.org2018-02-24T15:15:30Z
cue-login-env1.0bridges.psc.xsede.orgXSEDE Common User Environment CUE_* shell environment variables2018-02-24T15:02:11Z
cufflinks2.1.1stampede.tacc.xsede.orgcufflinks - Transcript assembly, differential expression, and differential regulation for RNA-Seq2018-01-29T21:56:50Z
cufflinks2.1.1supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
cufflinks2.2.1bridges.psc.xsede.org2018-02-24T15:02:11Z
cufflinks2.2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
cufflinks2.2.1stampede.tacc.xsede.orgcufflinks - Transcript assembly, differential expression, and differential regulation for RNA-Seq2018-01-29T21:56:50Z
cufflinks2.2.1stampede2.tacc.xsede.orgCufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples2018-02-24T15:09:22Z
cutadapt1.14stampede2.tacc.xsede.orgTrim adapters from high-throughput sequencing reads2018-02-24T15:09:22Z
cutadapt1.5bridges.psc.xsede.orgcutadapt: Reads a FASTA or FASTQ file, finds and removes adapters, and writes the changed sequence to standard output.2018-02-24T15:02:11Z
cvmfs_preload20160902xstream.stanford.xsede.org2018-02-24T15:09:07Z
cxx114.9.1stampede.tacc.xsede.org2018-01-29T21:56:50Z
cxx114.9.1wrangler.tacc.xsede.org2018-02-24T14:49:23Z
dakota6.4.0stampede.tacc.xsede.orgDakota toolkit provides a flexible, extensible interface between analysis codes and iterative systems analysis methods2018-01-29T21:56:50Z
dakota6.6.0stampede2.tacc.xsede.orgDakota toolkit provides a flexible, extensible interface between analysis codes and iterative systems analysis methods2018-02-24T15:09:22Z
dammit0.3bridges.psc.xsede.orgdammit is a simple de novo transcriptome annotator.2018-02-24T15:02:11Z
ddt18.0.1stampede2.tacc.xsede.orgParallel, graphical, symbolic debugger2018-02-24T15:09:22Z
ddt4.2.1supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
ddt5.0.1maverick.tacc.xsede.orgParallel, graphical, symbolic debugger2018-02-24T15:15:30Z
ddt6.0.2bridges.psc.xsede.org2018-02-24T15:02:11Z
ddt6.0.3stampede.tacc.xsede.orgParallel, graphical, symbolic debugger2018-01-29T21:56:51Z
ddt7.0bridges.psc.xsede.org2018-02-24T15:02:11Z
ddt7.0.3stampede2.tacc.xsede.orgParallel, graphical, symbolic debugger2018-02-24T15:09:22Z
ddt7.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
ddt_mic5.1stampede.tacc.xsede.orgParallel, graphical, symbolic debugger2018-01-29T21:56:50Z
dealii8.2.1stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2018-01-29T21:56:50Z
dealii8.4.1stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2018-01-29T21:56:50Z
dealiigit20170615stampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
decryption2.3.4.2stampede.tacc.xsede.orgDecryption tool is a subset of SRA Toolkit for decrypting the encrypted non-SRA data2018-01-29T21:56:50Z
deepTools2.5.6stampede2.tacc.xsede.orgUser-friendly tools for exploring deep-sequencing data2018-02-24T15:09:22Z
deeptools2.3.5bridges.psc.xsede.orgdeepTools is a suite of python tools developed for analysis of high-througput sequencing data2018-02-24T15:02:11Z
dendropy4.0.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
desmond2016.1bridges.psc.xsede.org2018-02-24T15:02:11Z
detonate1.10bridges.psc.xsede.org2018-02-24T15:02:11Z
diamond0.7.11bridges.psc.xsede.org2018-02-24T15:02:11Z
diamond0.7.12comet.sdsc.xsede.org2018-02-24T15:01:01Z
diamond0.8.31bridges.psc.xsede.orgDiamond; A fast blastx/blastp replacement for metagenomics.2018-02-24T15:02:11Z
discovar52488bridges.psc.xsede.org2018-02-24T15:02:11Z
discovardenovo52488bridges.psc.xsede.org2018-02-24T15:02:11Z
dizzy1.11.4stampede.tacc.xsede.orgdizzy -chemical kinetics stochastic simulation software package written in Java.2018-01-29T21:56:51Z
dock6.7stampede.tacc.xsede.orgDOCK is a structure-based docking program used to predict the binding mode of small molecule ligands to target receptors, such as proteins.2018-01-29T21:56:50Z
dock6.8.0stampede2.tacc.xsede.orgDOCK is a structure-based small molecule docking tool2018-02-24T15:09:22Z
dotnonecomet.sdsc.xsede.org Adds `.' to your PATH environment variable This makes it easy to add the current working directory to your PATH environment variable. This allows you to run executables in your current working directory without prepending ./ to the excutable name Version $dotversion2018-02-24T15:01:01Z
drive-data6.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
ectools2014-12-01bridges.psc.xsede.org2018-02-24T15:02:11Z
edena3.131028comet.sdsc.xsede.org2018-02-24T15:01:01Z
edenaV3.130110stampede.tacc.xsede.orgde novo short reads assembler2018-01-29T21:56:51Z
eigen3.2.7comet.sdsc.xsede.org2018-02-24T15:01:01Z
eigen3.2.8bridges.psc.xsede.org2018-02-24T15:02:11Z
elemental0.87-Debugstampede2.tacc.xsede.orgLibrary for distributed dense linear algebra2018-02-24T15:09:22Z
elemental0.87-Releasestampede2.tacc.xsede.orgLibrary for distributed dense linear algebra2018-02-24T15:09:22Z
elph1.0.1bridges.psc.xsede.orgELPH is a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences.2018-02-24T15:02:11Z
eman1.9stampede.tacc.xsede.orgeman - Software for Single Particle Analysis and Electron Micrograph Analysis2018-01-29T21:56:51Z
eman2.12stampede.tacc.xsede.orgEMAN2 is a scientific image processing suite for single particle reconstruction from cryoEM.2018-01-29T21:56:51Z
eman2.2stampede2.tacc.xsede.orgEMAN2 is a scientific image processing suite for single particle reconstruction from cryoEM2018-02-24T15:09:22Z
eman22.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
emboss6.5.7comet.sdsc.xsede.org2018-02-24T15:01:01Z
emboss6.6.0bridges.psc.xsede.org2018-02-24T15:02:11Z
ericscript0.5.5bridges.psc.xsede.org2018-02-24T15:02:11Z
espresso5.4.0stampede.tacc.xsede.orgintegrated suite of computer codes for electronic structure calculations and material modeling at the nanoscale.2018-01-29T21:56:50Z
express1.3.0stampede.tacc.xsede.orgexpress - Streaming quantification for high-throughput sequencing2018-01-29T21:56:50Z
falcon0.4.1bridges.psc.xsede.org2018-02-24T15:02:11Z
fasta-splitter0.2.4bridges.psc.xsede.org2018-02-24T15:02:11Z
fastq-splitter0.1.2bridges.psc.xsede.org2018-02-24T15:02:11Z
fastqc0.10.1stampede.tacc.xsede.orgfastqc - A Quality Control application for FastQ files2018-01-29T21:56:50Z
fastqc0.11.3bridges.psc.xsede.org2018-02-24T15:02:11Z
fastqc0.11.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
fastqc0.11.5stampede.tacc.xsede.orgfastqc - A Quality Control application for FastQ files2018-01-29T21:56:50Z
fastqc0.11.5stampede2.tacc.xsede.orgA quality control tool for high throughput sequence data2018-02-24T15:09:22Z
fasttree2.1.8comet.sdsc.xsede.org2018-02-24T15:01:01Z
fastx0.0.14bridges.psc.xsede.org2018-02-24T15:02:11Z
fastx0.0.14comet.sdsc.xsede.org2018-02-24T15:01:01Z
fastx_toolkit0.0.13.2stampede.tacc.xsede.orgFASTX Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing.2018-01-29T21:56:51Z
fastx_toolkit0.0.14stampede2.tacc.xsede.orgCommand line tools for Short-Reads FASTA/FASTQ files preprocessing.2018-02-24T15:09:22Z
ffmpeg2.1.4maverick.tacc.xsede.orgA library to record, convert and stream audio and video.2018-02-24T15:15:30Z
ffmpeg2.1.4stampede.tacc.xsede.orgA library to record, convert and stream audio and video.2018-01-29T21:56:51Z
ffmpeg3.1.1bridges.psc.xsede.org2018-02-24T15:02:11Z
fftw2.1.5comet.sdsc.xsede.org2018-02-24T15:01:01Z
fftw3.3.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
fftw22.1.5stampede.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2018-01-29T21:56:50Z
fftw22.1.5stampede2.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2018-02-24T15:09:22Z
fftw33.3.4bridges.psc.xsede.org2018-02-24T15:02:11Z
fftw33.3.4stampede.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2018-01-29T21:56:50Z
fftw33.3.4wrangler.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2018-02-24T14:49:23Z
fftw33.3.6stampede2.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2018-02-24T15:09:22Z
flash1.2.11bridges.psc.xsede.org2018-02-24T15:02:11Z
flex2.5.39xstream.stanford.xsede.org2018-02-24T15:09:06Z
flex2.6.0bridges.psc.xsede.org2018-02-24T15:02:11Z
fluentfluentbridges.psc.xsede.orgFluent is part of ANSYS. Load the ANSYS module to have access to Fluent.2018-02-24T15:02:11Z
foss2015.05xstream.stanford.xsede.org2018-02-24T15:09:06Z
fraggenescan1.20bridges.psc.xsede.org2018-02-24T15:02:11Z
frealign9.11comet.sdsc.xsede.org2018-02-24T15:01:01Z
freesurfer5.3.0stampede.tacc.xsede.orgfreesurfer - a set of tools for analysis and visualization of structural and functional brain imaging data. Common commands include recon-all, etc.2018-01-29T21:56:51Z
fsa1.15.9comet.sdsc.xsede.org2018-02-24T15:01:01Z
ftools6.18bridges.psc.xsede.org2018-02-24T15:02:11Z
ga5.3stampede.tacc.xsede.orgGlobal Array library and include files2018-01-29T21:56:50Z
gamess05_2013stampede.tacc.xsede.orgGeneral ab initio quantum chemistry package2018-01-29T21:56:50Z
gamess2017.04comet.sdsc.xsede.org2018-02-24T15:01:01Z
gamessV2014bridges.psc.xsede.org2018-02-24T15:02:11Z
garli2.01comet.sdsc.xsede.org2018-02-24T15:01:01Z
gateway-usage-reporting1.0comet.sdsc.xsede.org gateway-usage-reporting/1.0 adds gateway-usage-reporting tool to paths in the login shell environment2018-02-24T15:01:01Z
gateway-usage-reporting1.0stampede.tacc.xsede.orgadds gateway-usage-reporting tool to paths in the login shell environment2018-01-29T21:56:50Z
gateway-usage-reporting1.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
gateway-usage-reporting1.0wrangler.tacc.xsede.orgadds gateway-usage-reporting tool to paths in the login shell environment2018-02-24T14:49:23Z
gateway-usage-reporting2.0stampede.tacc.xsede.orgadds gateway-usage-reporting tool to paths in the login shell environment2018-01-29T21:56:50Z
gateway-usage-reporting2.0stampede2.tacc.xsede.orgadds gateway-usage-reporting tool to paths in the login shell environment2018-02-24T15:09:22Z
gateway-usage-reporting2.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
gateway-usage-reporting2.0wrangler.tacc.xsede.orgadds gateway-usage-reporting tool to paths in the login shell environment2018-02-24T14:49:23Z
gateway_submit_attributes2.0bridges.psc.xsede.orgXSEDE gateway_submit_attributes client2018-02-24T15:02:11Z
gateway_submit_attributes2.0r3bridges.psc.xsede.orgXSEDE gateway_submit_attributes client2018-02-24T15:02:11Z
gatk2.3.9stampede.tacc.xsede.org2018-01-29T21:56:51Z
gatk2.5.2stampede.tacc.xsede.org2018-01-29T21:56:51Z
gatk2.7.2stampede.tacc.xsede.org2018-01-29T21:56:51Z
gatk3.2.2stampede.tacc.xsede.org2018-01-29T21:56:51Z
gatk3.5bridges.psc.xsede.orgA Genome Analysis Toolkit for variant discovery and genotyping.2018-02-24T15:02:11Z
gatk3.5.0stampede.tacc.xsede.orgThe Genome Analysis Toolkit or GATK is a software package developed at the Broad Institute to analyze high-throughput sequencing data.2018-01-29T21:56:51Z
gatk3.6bridges.psc.xsede.orgA Genome Analysis Toolkit for variant discovery and genotyping.2018-02-24T15:02:11Z
gatk3.7bridges.psc.xsede.orgA Genome Analysis Toolkit for variant discovery and genotyping.2018-02-24T15:02:11Z
gatk3.8bridges.psc.xsede.orgA Genome Analysis Toolkit for variant discovery and genotyping.2018-02-24T15:02:11Z
gatk3.8.0stampede2.tacc.xsede.orgThe Genome Analysis ToolKit is used to to analyze high-throughput sequencing data2018-02-24T15:09:22Z
gatk4.beta.5bridges.psc.xsede.orgA Genome Analysis Toolkit for variant discovery and genotyping.2018-02-24T15:02:11Z
gaussian09stampede.tacc.xsede.orgGaussian 09 quantum chemistry package2018-01-29T21:56:50Z
gaussian09.D.01bridges.psc.xsede.org2018-02-24T15:02:11Z
gaussian09.D.01comet.sdsc.xsede.org2018-02-24T15:01:01Z
gaussian09.E.01bridges.psc.xsede.org2018-02-24T15:02:11Z
gaussian16.A.03comet.sdsc.xsede.org2018-02-24T15:01:01Z
gaussian16rA.03stampede2.tacc.xsede.orgGaussian 16 quantum chemistry package2018-02-24T15:09:22Z
gaussianG16bridges.psc.xsede.org2018-02-24T15:02:11Z
gcc4.4.6stampede.tacc.xsede.org2018-01-29T21:56:51Z
gcc4.6.3stampede.tacc.xsede.org2018-01-29T21:56:51Z
gcc4.7.1maverick.tacc.xsede.org2018-02-24T15:15:30Z
gcc4.7.1stampede.tacc.xsede.org2018-01-29T21:56:51Z
gcc4.7.2bridges.psc.xsede.org2018-02-24T15:02:11Z
gcc4.8.1xstream.stanford.xsede.org2018-02-24T15:09:07Z
gcc4.8.4bridges.psc.xsede.org2018-02-24T15:02:11Z
gcc4.9.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
gcc4.9.1maverick.tacc.xsede.org2018-02-24T15:15:30Z
gcc4.9.1stampede.tacc.xsede.org2018-01-29T21:56:51Z
gcc4.9.1wrangler.tacc.xsede.org2018-02-24T14:49:23Z
gcc4.9.3maverick.tacc.xsede.org2018-02-24T15:15:30Z
gcc4.9.3stampede.tacc.xsede.org2018-01-29T21:56:51Z
gcc4.9.3wrangler.tacc.xsede.org2018-02-24T14:49:23Z
gcc5.3.0bridges.psc.xsede.org2018-02-24T15:02:11Z
gcc5.4.0maverick.tacc.xsede.org2018-02-24T15:15:30Z
gcc5.4.0stampede2.tacc.xsede.org2018-02-24T15:09:22Z
gcc6.3.0bridges.psc.xsede.org2018-02-24T15:02:11Z
gcc6.3.0stampede2.tacc.xsede.org2018-02-24T15:09:22Z
gcc6.3.0wrangler.tacc.xsede.org2018-02-24T14:49:23Z
gcc7.1.0stampede2.tacc.xsede.org2018-02-24T15:09:22Z
gcc7.2.0bridges.psc.xsede.org2018-02-24T15:02:11Z
gcc7.3.0bridges.psc.xsede.org2018-02-24T15:02:11Z
gdal2.2.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
gdal2.2.1bridges.psc.xsede.orgTranslator library for raster and vector geospatial data formats2018-02-24T15:02:11Z
gdc-client1.3.0bridges.psc.xsede.orgTools for downloading data from the Genome Data Commons (GDC).2018-02-24T15:02:11Z
geant410.3.p02stampede2.tacc.xsede.orgGeant4 is a toolkit for the simulation of the passage of particles through matter2018-02-24T15:09:22Z
genome-music0.4.1bridges.psc.xsede.org2018-02-24T15:02:11Z
genomemapper0.4.3stampede.tacc.xsede.orgGenomeMapper - short read mapping tool2018-01-29T21:56:50Z
geos3.6.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
gffread0.9.8cbridges.psc.xsede.orggffread - gffread can be used to validate, filter, convert and perform various other operations on GFF files2018-02-24T15:02:11Z
gflags2.2.0bridges.psc.xsede.org2018-02-24T15:02:11Z
git2.10.2bridges.psc.xsede.org2018-02-24T15:02:11Z
git2.4.1wrangler.tacc.xsede.orgFast Version Control System2018-02-24T14:49:23Z
git2.7.0maverick.tacc.xsede.orgFast Version Control System2018-02-24T15:15:30Z
git2.7.0stampede.tacc.xsede.orgFast Version Control System2018-01-29T21:56:51Z
git2.9.0stampede2.tacc.xsede.orgFast Version Control System2018-02-24T15:09:22Z
glimmer3.02bridges.psc.xsede.orgGlimmer is a system for finding genes in microbial DNA, especially the genomes of bacteria, archaea, and viruses.2018-02-24T15:02:11Z
glimmerhmm3.0.4bridges.psc.xsede.orgGlimmerHMM is a gene finder based on a Generalized Hidden Markov Model (GHMM)2018-02-24T15:02:11Z
globus5.0.4-r1supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
globus5.2.5comet.sdsc.xsede.org2018-02-24T15:01:01Z
globus5.7-8supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
globus6.0maverick.tacc.xsede.orgGlobus Software Package2018-02-24T15:15:30Z
globus6.0stampede.tacc.xsede.orgGlobus Software Package2018-01-29T21:56:50Z
globus6.0stampede2.tacc.xsede.orgGlobus Software Package2018-02-24T15:09:22Z
globus6.0supermic.cct-lsu.xsede.org2018-02-24T15:22:57Z
globus6.0wrangler.tacc.xsede.orgGlobus Software Package2018-02-24T14:49:23Z
glog0.3.5bridges.psc.xsede.org2018-02-24T15:02:11Z
gmake4.0stampede.tacc.xsede.orgGNU Make2018-01-29T21:56:51Z
gmap20130911stampede.tacc.xsede.orgGMAP: a genomic mapping and alignment program for mRNA and EST sequences2018-01-29T21:56:51Z
gmap-gsnap20140220stampede.tacc.xsede.orgGMAP: a genomic mapping and alignment program for mRNA and EST sequences2018-01-29T21:56:50Z
gmap_gsnap20151231comet.sdsc.xsede.org2018-02-24T15:01:01Z
gmp6.0.0acomet.sdsc.xsede.org2018-02-24T15:01:01Z
gmt5.1.1stampede.tacc.xsede.orginterpreted programming language2018-01-29T21:56:50Z
gmt5.2.1stampede.tacc.xsede.orgGeneric Mapping Tools: Tools for manipulating geographic and Cartesian data sets2018-01-29T21:56:50Z
gmt5.3.3stampede2.tacc.xsede.orgGeneric Mapping Tools: Tools for manipulating geographic and Cartesian data sets2018-02-24T15:09:22Z
gnu4.9.2comet.sdsc.xsede.orgUnloading compiler-dependent module $app2018-02-24T15:01:01Z
gnu_parallel20160822bridges.psc.xsede.orgGNU parallel is a shell tool for executing jobs in parallel using one or more computers.2018-02-24T15:02:11Z
gnuparallel20170122supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
gnutools2.69comet.sdsc.xsede.org2018-02-24T15:01:01Z
gompi2015.05xstream.stanford.xsede.org2018-02-24T15:09:06Z
grace5.1.23stampede.tacc.xsede.orgA portable GUI driven interactive data and function plotting utility. This GUI must be run on the development or vis nodes or your account may be temporarily suspended.2018-01-29T21:56:50Z
grace5.1.25bridges.psc.xsede.org2018-02-24T15:02:11Z
grace5.1.25comet.sdsc.xsede.org2018-02-24T15:01:01Z
graphlan0.9.7bridges.psc.xsede.orgGraPhlAn is a software tool for producing high-quality circular representations of taxonomic and phylogenetic trees. It focuses on concise, integrative, informative, and publication-ready representations of phylogenetically- and taxonomically-driven investigation.2018-02-24T15:02:11Z
gromacs2016.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
gromacs2016.3stampede2.tacc.xsede.orgmolecular dynamics simulation package2018-02-24T15:09:22Z
gromacs2016.4stampede2.tacc.xsede.orgmolecular dynamics simulation package2018-02-24T15:09:22Z
gromacs2016_cpubridges.psc.xsede.org2018-02-24T15:02:11Z
gromacs2016_gpubridges.psc.xsede.org2018-02-24T15:02:11Z
gromacs5.0.6stampede.tacc.xsede.orgmolecular dynamics simulation package2018-01-29T21:56:50Z
gromacs5.1.2bridges.psc.xsede.org2018-02-24T15:02:11Z
gromacs5.1.2stampede.tacc.xsede.orgmolecular dynamics simulation package2018-01-29T21:56:50Z
gromacs5.1.2stampede2.tacc.xsede.orgmolecular dynamics simulation package2018-02-24T15:09:22Z
gsissh7.1p2maverick.tacc.xsede.orgGlobus GSI OpenSSH utility2018-02-24T15:15:30Z
gsissh7.1p2stampede.tacc.xsede.orgGlobus GSI OpenSSH utility2018-01-29T21:56:50Z
gsissh7.1p2stampede2.tacc.xsede.orgGlobus GSI OpenSSH utility2018-02-24T15:09:22Z
gsissh7.1p2wrangler.tacc.xsede.orgGlobus GSI OpenSSH utility2018-02-24T14:49:23Z
gsl1.16comet.sdsc.xsede.org2018-02-24T15:01:01Z
gsl1.16maverick.tacc.xsede.orgprovides wide range of mathematical routines such as random number generators, special functions and least-squares fitting.2018-02-24T15:15:30Z
gsl1.16stampede.tacc.xsede.orgprovides wide range of mathematical routines such as random number generators, special functions and least-squares fitting.2018-01-29T21:56:50Z
gsl1.16wrangler.tacc.xsede.orgprovides wide range of mathematical routines such as random number generators, special functions and least-squares fitting.2018-02-24T14:49:23Z
gsl2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
gsl2.3stampede2.tacc.xsede.org2018-02-24T15:09:22Z
gsnap20120720stampede.tacc.xsede.orggsnap - Genomic Short-read Nucleotide Alignment Program2018-01-29T21:56:51Z
guile2.0.11comet.sdsc.xsede.org2018-02-24T15:01:01Z
gulp4.3stampede.tacc.xsede.orgGulp - A lattice dynamics program2018-01-29T21:56:50Z
gulp5.0stampede2.tacc.xsede.orgGulp - A lattice dynamics program2018-02-24T15:09:22Z
gurobi7.5.1bridges.psc.xsede.org2018-02-24T15:02:11Z
gurobi7.5.2bridges.psc.xsede.org2018-02-24T15:02:11Z
gx-map0.5.3.3maverick.tacc.xsede.orgTeraGrid GX-Map utility2018-02-24T15:15:30Z
gx-map0.5.3.3-r1supermic.cct-lsu.xsede.orgTeraGrid GX Map utility2018-02-24T15:22:56Z
h5utils1.12.1stampede.tacc.xsede.orgcontains several programs to post-process HDF54 data.2018-01-29T21:56:50Z
hadoop2.7.2bridges.psc.xsede.orgA Big Data processing framework.2018-02-24T15:02:11Z
hadoop-paths2.5.0wrangler.tacc.xsede.org2018-02-24T14:49:23Z
hdf42.11comet.sdsc.xsede.org2018-02-24T15:01:01Z
hdf51.10.1_gnubridges.psc.xsede.org2018-02-24T15:02:11Z
hdf51.8.12maverick.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Serial Version).2018-02-24T15:15:30Z
hdf51.8.14comet.sdsc.xsede.orgmust specify one of the following mpi modules: mvapich2_ib openmpi_ib2018-02-24T15:01:01Z
hdf51.8.14wrangler.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Serial Version).2018-02-24T14:49:23Z
hdf51.8.16stampede.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Serial Version).2018-01-29T21:56:50Z
hdf51.8.16stampede2.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Serial Version).2018-02-24T15:09:22Z
hdf51.8.16_gnubridges.psc.xsede.org2018-02-24T15:02:11Z
hdf51.8.16_intelbridges.psc.xsede.org2018-02-24T15:02:11Z
hisat22.0.4bridges.psc.xsede.org2018-02-24T15:02:11Z
hmmer2.3.2bridges.psc.xsede.org2018-02-24T15:02:11Z
hmmer3.1b2bridges.psc.xsede.org2018-02-24T15:02:11Z
hmmer3.1b2comet.sdsc.xsede.org2018-02-24T15:01:01Z
hmmer3.1b2stampede2.tacc.xsede.orgHMMER biosequence analysis using profile hidden Markov models2018-02-24T15:09:22Z
homer4.9_2-20-2017bridges.psc.xsede.orgA suite of tools for Motif Discovery and next-gen sequencing analysis2018-02-24T15:02:11Z
hpctoolkit2017.10stampede2.tacc.xsede.orgProfiler2018-02-24T15:09:22Z
hpctoolkit5.3.2stampede.tacc.xsede.orgProfiler2018-01-29T21:56:51Z
hpnssh7.5p1-hpn14v12bridges.psc.xsede.orgHPN-enabled OpenSSH clients2018-02-24T15:02:11Z
htseq0.6.1p1comet.sdsc.xsede.org2018-02-24T15:01:01Z
htseq0.6.1p1stampede.tacc.xsede.orgHTSeq - Analysing high-throughput sequencing data with Python2018-01-29T21:56:51Z
htseq0.9.1bridges.psc.xsede.orgHTSeq is a Python package that provides infrastructure to process data from high-throughput sequencing assays.2018-02-24T15:02:11Z
htseq0.9.1stampede2.tacc.xsede.orgHTSeq is a Python package that provides infrastructure to process data from high-throughput sequencing assays2018-02-24T15:09:22Z
humann20.10.0bridges.psc.xsede.orgThe HMP Unified Metabolic Analysis Network 22018-02-24T15:02:11Z
hypre2.10.0b-LargeScalestampede.tacc.xsede.orgLibrary of scalable solvers2018-01-29T21:56:50Z
hypre2.10.0b-SmallScalestampede.tacc.xsede.orgLibrary of scalable solvers2018-01-29T21:56:50Z
hypre2.11stampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
hypre2.11-complexstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
hypre2.11-complexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
hypre2.11-cxxstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
hypre2.11-cxxcomplexstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
hypre2.11-cxxcomplexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
hypre2.11-cxxdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
hypre2.11-debugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
hypre2.11.1stampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
hypre2.11.1-complexstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
hypre2.11.1-complexdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
hypre2.11.1-cxxstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
hypre2.11.1-cxxcomplexstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
hypre2.11.1-cxxcomplexdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
hypre2.11.1-cxxdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
hypre2.11.1-debugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
icc16.0.2bridges.psc.xsede.org2018-02-24T15:02:11Z
icc16.0.3bridges.psc.xsede.org2018-02-24T15:02:11Z
icc2015.5.223-GNU-4.9.2-2.25xstream.stanford.xsede.org2018-02-24T15:09:06Z
iccifort2015.5.223-GNU-4.9.2-2.25xstream.stanford.xsede.org2018-02-24T15:09:06Z
idba1.1.3stampede.tacc.xsede.orgDe novo assembler for short read sequencing data2018-01-29T21:56:51Z
idba-tran1.1.1bridges.psc.xsede.org2018-02-24T15:02:11Z
idba-tran1.1.1_longbridges.psc.xsede.org2018-02-24T15:02:11Z
idba-ud1.1.1bridges.psc.xsede.org2018-02-24T15:02:11Z
idba-ud1.1.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
idev1.0maverick.tacc.xsede.orgInteractive Access to Compute Node(s) for Development via Batch System2018-02-24T15:15:30Z
idev1.3stampede.tacc.xsede.orgInteractive Access to Compute Node(s) for Development via Batch System2018-01-29T21:56:50Z
idev1.3.0wrangler.tacc.xsede.orgInteractive Access to Compute Node(s) for Development via Batch System2018-02-24T14:49:23Z
idev1.5.3stampede2.tacc.xsede.orgInteractive Access to Compute Node(s) for Development via Batch System2018-02-24T15:09:22Z
idl7.0.6maverick.tacc.xsede.orgIDL interactive graphing and visualization toolkit2018-02-24T15:15:30Z
idl7.0.6stampede.tacc.xsede.orgIDL interactive graphing and visualization toolkit2018-01-29T21:56:50Z
idl8.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
idl8.4maverick.tacc.xsede.org2018-02-24T15:15:30Z
idl8.4stampede.tacc.xsede.org2018-01-29T21:56:50Z
idl8.4stampede2.tacc.xsede.org2018-02-24T15:09:22Z
idl8.4wrangler.tacc.xsede.org2018-02-24T14:49:23Z
ifort2015.5.223-GNU-4.9.2-2.25xstream.stanford.xsede.org2018-02-24T15:09:06Z
igvtools2.3.26stampede.tacc.xsede.orgThe Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets. IGVtools is for preprocessing data files2018-01-29T21:56:50Z
iimpi7.3.5-GNU-4.9.2-2.25xstream.stanford.xsede.org2018-02-24T15:09:06Z
impi17.0.3stampede2.tacc.xsede.orgIntel MPI Library (C/C++/Fortran for x86_64)2018-02-24T15:09:22Z
impi18.0.0stampede2.tacc.xsede.orgIntel MPI Library (C/C++/Fortran for x86_64)2018-02-24T15:09:22Z
impi4.1.3.049maverick.tacc.xsede.orgIntel MPI Library (C/C++/Fortran for x86_64)2018-02-24T15:15:30Z
impi5.0.2stampede.tacc.xsede.orgIntel MPI Library (C/C++/Fortran for x86_64)2018-01-29T21:56:50Z
impi5.0.3maverick.tacc.xsede.orgIntel MPI Library (C/C++/Fortran for x86_64)2018-02-24T15:15:30Z
impi5.0.3wrangler.tacc.xsede.orgIntel MPI Library (C/C++/Fortran for x86_64)2018-02-24T14:49:23Z
infernal1.1.2bridges.psc.xsede.orgInfernal - Sequence analysis using profiles of RNA sequence and secondary structure consensus2018-02-24T15:02:11Z
inspector2018.1.0stampede2.tacc.xsede.orgIntel Inspector2018-02-24T15:09:22Z
intel13.0.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
intel13.0.2.146stampede.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2018-01-29T21:56:50Z
intel13.1.3supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
intel14.0.1.106maverick.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2018-02-24T15:15:30Z
intel14.0.1.106stampede.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2018-01-29T21:56:50Z
intel14.0.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
intel15.0.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
intel15.0.2stampede.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2018-01-29T21:56:50Z
intel15.0.3maverick.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2018-02-24T15:15:30Z
intel15.0.3wrangler.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2018-02-24T14:49:23Z
intel16.0.3stampede2.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2018-02-24T15:09:22Z
intel17.0.4stampede2.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2018-02-24T15:09:22Z
intel17.4bridges.psc.xsede.org2018-02-24T15:02:12Z
intel18.0.0stampede2.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2018-02-24T15:09:22Z
intel18.0.0.128bridges.psc.xsede.org2018-02-24T15:02:12Z
intel2013xstream.stanford.xsede.org2018-02-24T15:09:07Z
intel2013_sp1.2.144comet.sdsc.xsede.orgUnloading compiler-dependent module $app2018-02-24T15:01:01Z
intel2015.2.164comet.sdsc.xsede.orgUnloading compiler-dependent module $app2018-02-24T15:01:01Z
intel2015.5.223xstream.stanford.xsede.org2018-02-24T15:09:06Z
intel2016xstream.stanford.xsede.org2018-02-24T15:09:07Z
intel2016.3supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
intel2017.4supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
intel2018.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
intelcompilersbridges.psc.xsede.org2018-02-24T15:02:12Z
intelcompilers-2017bridges.psc.xsede.org2018-02-24T15:02:12Z
inteldefaultxstream.stanford.xsede.org2018-02-24T15:09:06Z
intelmpi-sh5.1.3.181bridges.psc.xsede.org2018-02-24T15:02:12Z
intelpython2.7.12bridges.psc.xsede.org2018-02-24T15:02:12Z
intelpython3.5.2bridges.psc.xsede.org2018-02-24T15:02:12Z
ipm0.983stampede.tacc.xsede.orgIntegrated Performance Monitoring2018-01-29T21:56:50Z
ipm2.0.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
irods3.3.1stampede.tacc.xsede.orgirods2018-01-29T21:56:51Z
irods4wrangler.tacc.xsede.orgirods2018-02-24T14:49:23Z
irods4.2.1stampede2.tacc.xsede.org2018-02-24T15:09:22Z
irods4.2.2stampede2.tacc.xsede.orgiCommands - command line interface to iRODS2018-02-24T15:09:22Z
itac17.0.3stampede2.tacc.xsede.orgIntel Trace Analyzer and Collector2018-02-24T15:09:22Z
itac9.0.3stampede.tacc.xsede.orgIntel Trace Analyzer and Collector2018-01-29T21:56:51Z
jags4.3.0bridges.psc.xsede.org2018-02-24T15:02:12Z
jasper1.900.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
java1.7.0supermic.cct-lsu.xsede.orgJava2018-02-24T15:22:56Z
javajdk8u73bridges.psc.xsede.org2018-02-24T15:02:12Z
java-paths1.7.0wrangler.tacc.xsede.org2018-02-24T14:49:23Z
java641.8.0wrangler.tacc.xsede.orgJava2018-02-24T14:49:23Z
java641.8.0wrangler.tacc.xsede.org2018-02-24T14:49:23Z
java7jdk7u80bridges.psc.xsede.org2018-02-24T15:02:12Z
jdk321.7.0maverick.tacc.xsede.orgJava2018-02-24T15:15:30Z
jdk321.7.0stampede.tacc.xsede.orgJava2018-01-29T21:56:50Z
jdk321.7.0wrangler.tacc.xsede.orgJava2018-02-24T14:49:23Z
jdk321.8.0maverick.tacc.xsede.orgJava2018-02-24T15:15:30Z
jdk321.8.0stampede.tacc.xsede.orgJava2018-01-29T21:56:50Z
jdk321.8.0wrangler.tacc.xsede.orgJava2018-02-24T14:49:23Z
jdk641.8.0stampede.tacc.xsede.orgJava2018-01-29T21:56:50Z
jdk641.8.0wrangler.tacc.xsede.orgJava2018-02-24T14:49:23Z
jellyfish1.1.11bridges.psc.xsede.orgSoftware to count k-mers in DNA sequences2018-02-24T15:02:12Z
jellyfish2.2.6wrangler.tacc.xsede.orgA fast, lock-free approach for efficient parallel counting of occurrences of k-mers.2018-02-24T14:49:23Z
jellyfish22.2.6bridges.psc.xsede.orgSoftware to count k-mers in DNA sequences2018-02-24T15:02:12Z
jpeg9bbridges.psc.xsede.org2018-02-24T15:02:12Z
julia0.5.2bridges.psc.xsede.org2018-02-24T15:02:12Z
julia0.6.0bridges.psc.xsede.org2018-02-24T15:02:12Z
julia0.6.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
kallisto0.43.0bridges.psc.xsede.orgKallisto is a program for quantifying abundances of transcripts from RNA-Seq data.2018-02-24T15:02:12Z
kallisto0.43.1stampede2.tacc.xsede.orgKallisto is a program for quantifying abundances of transcripts from RNA-Seq data2018-02-24T15:09:22Z
kentUtils302.1.0stampede2.tacc.xsede.orgJim Kent command line bioinformatic utilities2018-02-24T15:09:22Z
keras1.1.2bridges.psc.xsede.org2018-02-24T15:02:12Z
keras2.0.4bridges.psc.xsede.org2018-02-24T15:02:12Z
keras2.0.6_anacondabridges.psc.xsede.org2018-02-24T15:02:12Z
keras2.0.6_anaconda_nogpubridges.psc.xsede.org2018-02-24T15:02:12Z
khmer2.0bridges.psc.xsede.orgA set of command-line tools for working with DNA shotgun sequencing data2018-02-24T15:02:12Z
kraken0.10.5-betabridges.psc.xsede.orgA taxonomic sequence classifier that assigns taxonomic labels to short DNA reads2018-02-24T15:02:12Z
lammps10Feb15stampede.tacc.xsede.orgMolecular Dynamics Chemistry Package2018-01-29T21:56:50Z
lammps17Nov16stampede2.tacc.xsede.orgMolecular Dynamics Chemistry Package2018-02-24T15:09:22Z
lammps20170331comet.sdsc.xsede.org2018-02-24T15:01:01Z
lammps31Mar17stampede2.tacc.xsede.orgMolecular Dynamics Chemistry Package2018-02-24T15:09:22Z
lapack3.6.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
lasagne0.1bridges.psc.xsede.org2018-02-24T15:02:12Z
lastz1.03.02stampede.tacc.xsede.orgAn efficient pairwise aligner2018-01-29T21:56:51Z
launcher1.4stampede.tacc.xsede.orgUtility for starting parametric job sweeps2018-01-29T21:56:51Z
launcher2.0maverick.tacc.xsede.orgUtility for starting parametric job sweeps2018-02-24T15:15:30Z
launcher2.0stampede.tacc.xsede.orgUtility for starting parametric job sweeps2018-01-29T21:56:51Z
launcher2.0wrangler.tacc.xsede.orgUtility for starting parametric job sweeps2018-02-24T14:49:23Z
launcher3.1stampede2.tacc.xsede.orgUtility for starting parametric job sweeps2018-02-24T15:09:22Z
leveldb1.18bridges.psc.xsede.org2018-02-24T15:02:12Z
leveldb1.20bridges.psc.xsede.org2018-02-24T15:02:12Z
libfabric1.4.2stampede2.tacc.xsede.orgFabric communication services2018-02-24T15:09:22Z
llvm3.3stampede.tacc.xsede.orga collection of modular and reusable compiler and toolchain technologies.2018-01-29T21:56:51Z
llvm3.6.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
lmod6.0.15xstream.stanford.xsede.orgLmod: An Environment Module System2018-02-24T15:09:07Z
lmod7.4.1stampede.tacc.xsede.orgAn environment module system2018-01-29T21:56:51Z
lmod7.7wrangler.tacc.xsede.orgAn environment module system2018-02-24T14:49:23Z
lmod7.7.1maverick.tacc.xsede.orgAn environment module system2018-02-24T15:15:30Z
lmod7.7.3stampede2.tacc.xsede.orgAn environment module system2018-02-24T15:09:22Z
ls-dynaR6_1_1_79036bridges.psc.xsede.org2018-02-24T15:02:12Z
ls-dynaR7_1_2_95028bridges.psc.xsede.org2018-02-24T15:02:12Z
ls-dynaR8_1_105897bridges.psc.xsede.org2018-02-24T15:02:12Z
ls-dynaR9_0_1_109912bridges.psc.xsede.org2018-02-24T15:02:12Z
ls-dynaR9_1_113698bridges.psc.xsede.org2018-02-24T15:02:12Z
ltools1.0stampede.tacc.xsede.org2018-01-29T21:56:51Z
ltools1.2stampede2.tacc.xsede.org2018-02-24T15:09:22Z
luatools1.1maverick.tacc.xsede.orgLibrary tools2018-02-24T15:15:30Z
luatools1.1stampede.tacc.xsede.orgLibrary tools2018-01-29T21:56:50Z
lz41.7.5stampede.tacc.xsede.orgLZ4 is a fast compression algorithm2018-01-29T21:56:51Z
lz41.7.5wrangler.tacc.xsede.orgLZ4 is a fast compression algorithm2018-02-24T14:49:23Z
mach1.0.18stampede.tacc.xsede.orgMarkov Chain based haplotyper2018-01-29T21:56:50Z
macs1.4.3bridges.psc.xsede.orgModel Based Analysis for ChIP-Seq data (MACS) for identifying transcription factor binding sites.2018-02-24T15:02:12Z
macs22.1.0stampede.tacc.xsede.orgMACS2 - Model-based Analysis of ChIP-Seq2018-01-29T21:56:50Z
macs22.1.1stampede2.tacc.xsede.orgMACS2 empirically models the length of the sequenced ChIP fragments and uses it to improve the spatial resolution of predicted binding sites2018-02-24T15:09:22Z
macs22.1.1.20160309stampede.tacc.xsede.orgMACS2 - Model-based Analysis of ChIP-Seq2018-01-29T21:56:50Z
macse1.2bridges.psc.xsede.org2018-02-24T15:02:12Z
mafft7.017stampede.tacc.xsede.orgMultiple alignment program for amino acid or nucleotide sequences2018-01-29T21:56:51Z
mafft7.187comet.sdsc.xsede.org2018-02-24T15:01:01Z
mafft7.300bridges.psc.xsede.org2018-02-24T15:02:12Z
make4.2.1bridges.psc.xsede.org2018-02-24T15:02:12Z
mallet2.0.8RC3bridges.psc.xsede.org2018-02-24T15:02:12Z
malt0.3.8bridges.psc.xsede.orgMEGAN alignment tool, is a blast-like sequence alignment and analysis tool designed for processing high-throughput sequencing data, especially in the context of metagenomics.2018-02-24T15:02:12Z
mapsembler22.2.4bridges.psc.xsede.orgTargeted sequence assembler2018-02-24T15:02:12Z
marvel2018-20-01bridges.psc.xsede.orgMARVEL is a set of tools that facilitate the ovelapping, patching, correction, and assembly of long reads.2018-02-24T15:02:12Z
masurca3.1.3bridges.psc.xsede.org2018-02-24T15:02:12Z
masurca3.2.2bridges.psc.xsede.org2018-02-24T15:02:12Z
mathematica10.1supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
mathematica10.2wrangler.tacc.xsede.orgMathematica by Wolfram2018-02-24T14:49:23Z
mathematica10.4stampede.tacc.xsede.orgMathematica by Wolfram2018-01-29T21:56:51Z
mathematica10.4wrangler.tacc.xsede.orgMathematica by Wolfram2018-02-24T14:49:23Z
mathematica11.0bridges.psc.xsede.orgWolfram's Mathematica,Symbolic Algebra2018-02-24T15:02:12Z
mathematica11.2stampede2.tacc.xsede.orgcommercial technical computing system2018-02-24T15:09:22Z
mathematica11.2wrangler.tacc.xsede.orgcommercial technical computing system2018-02-24T14:49:23Z
mathematica9.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
matlab2013amaverick.tacc.xsede.orgMatlab 2013a from MathWorks2018-02-24T15:15:30Z
matlab2013astampede.tacc.xsede.orgMatlab 2013a from MathWorks2018-01-29T21:56:50Z
matlab2013bstampede.tacc.xsede.orgMatlab 2013b from MathWorks2018-01-29T21:56:50Z
matlab2014astampede.tacc.xsede.orgMatlab 2014a from MathWorks2018-01-29T21:56:50Z
matlab2014bstampede.tacc.xsede.orgMatlab 2014b from MathWorks2018-01-29T21:56:50Z
matlab2015astampede.tacc.xsede.orgMatlab 2015a from MathWorks2018-01-29T21:56:50Z
matlab2015awrangler.tacc.xsede.orgMatlab 2015a from MathWorks2018-02-24T14:49:23Z
matlab2015bstampede.tacc.xsede.orgMatlab 2015b from MathWorks2018-01-29T21:56:50Z
matlab2016astampede.tacc.xsede.orgMatlab 2016a from MathWorks2018-01-29T21:56:50Z
matlab2016bcomet.sdsc.xsede.org2018-02-24T15:01:01Z
matlab2016bstampede.tacc.xsede.orgMatlab 2016b from MathWorks2018-01-29T21:56:50Z
matlab2017amaverick.tacc.xsede.orgMatlab 2017a from MathWorks2018-02-24T15:15:30Z
matlab2017astampede2.tacc.xsede.orgMatlab 2017a from MathWorks2018-02-24T15:09:22Z
matlab2017awrangler.tacc.xsede.orgMatlab 2017a from MathWorks2018-02-24T14:49:23Z
matlab2017bstampede2.tacc.xsede.orgMatlab 2017b from MathWorks2018-02-24T15:09:22Z
matlabMCR_R2013abridges.psc.xsede.org2018-02-24T15:02:12Z
matlabR2016abridges.psc.xsede.org2018-02-24T15:02:12Z
matlabR2017abridges.psc.xsede.org2018-02-24T15:02:12Z
matlabr2013asupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
matlabr2015bsupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
matlabr2017asupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
matt1.00comet.sdsc.xsede.org2018-02-24T15:01:01Z
mauve2.3.1supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
maven3.3.9bridges.psc.xsede.org2018-02-24T15:02:12Z
maxbin2.1.1bridges.psc.xsede.org2018-02-24T15:02:12Z
mcr9.0.1_2016abridges.psc.xsede.org2018-02-24T15:02:12Z
mcr9.2stampede2.tacc.xsede.orgMatlab v9.2 Compiler Runtime from MathWorks2018-02-24T15:09:22Z
mcr9.3stampede2.tacc.xsede.orgMatlab v9.3 Compiler Runtime from MathWorks2018-02-24T15:09:22Z
mcrv81maverick.tacc.xsede.orgMatlab v81 Compiler Runtime from MathWorks2018-02-24T15:15:30Z
mcrv81stampede.tacc.xsede.orgMatlab v81 Compiler Runtime from MathWorks2018-01-29T21:56:50Z
mcrv82stampede.tacc.xsede.orgMatlab v82 Compiler Runtime from MathWorks2018-01-29T21:56:50Z
mcrv83stampede.tacc.xsede.orgMatlab v83 Compiler Runtime from MathWorks2018-01-29T21:56:50Z
mcrv84stampede.tacc.xsede.orgMatlab v84 for 2014b Compiler Runtime from MathWorks2018-01-29T21:56:50Z
mcrv85maverick.tacc.xsede.orgMatlab v85 Compiler Runtime from MathWorks2018-02-24T15:15:30Z
mcrv85stampede.tacc.xsede.orgMatlab v85 Compiler Runtime from MathWorks2018-01-29T21:56:50Z
mcrv85wrangler.tacc.xsede.orgMatlab v85 Compiler Runtime from MathWorks2018-02-24T14:49:23Z
mcrv90stampede.tacc.xsede.orgMatlab v90 Compiler Runtime from MathWorks2018-01-29T21:56:50Z
mcrv901stampede.tacc.xsede.orgMatlab v90.1 Compiler Runtime from MathWorks2018-01-29T21:56:50Z
mcrv91stampede.tacc.xsede.orgMatlab v91 Compiler Runtime from MathWorks2018-01-29T21:56:50Z
mct2.9.0bridges.psc.xsede.org2018-02-24T15:02:12Z
meep1.3stampede.tacc.xsede.orgMeep is a free finite-difference time-domain simulation software package2018-01-29T21:56:50Z
meep1.3stampede2.tacc.xsede.orgMeep is a free finite-difference time-domain simulation software package2018-02-24T15:09:22Z
megahit1.1.1bridges.psc.xsede.orgA single node assembler for large and complex metagenomics NGS reads, such as soil2018-02-24T15:02:12Z
megan5.11.3bridges.psc.xsede.org2018-02-24T15:02:12Z
meraculous2.2.4bridges.psc.xsede.orgA whole genome assembler for NGS data geared for large genomes.2018-02-24T15:02:12Z
metaphlan1.7.7bridges.psc.xsede.orgMETAgenomic PHyLogenetic ANalysis for taxonomic classification of metagenomic data2018-02-24T15:02:12Z
metaphlan22.6.0bridges.psc.xsede.orgMETAgenomic PHyLogenetic ANalysis for taxonomic classification of metagenomic data2018-02-24T15:02:12Z
metavelvet1.2.10-velvet-maxk245bridges.psc.xsede.orgMetaVelvet; An extension of the Velvet assembler for the de novo metagenome assembly of short sequence reads.2018-02-24T15:02:12Z
metavelvet1.2.10-velvet-maxk95bridges.psc.xsede.orgMetaVelvet; An extension of the Velvet assembler for the de novo metagenome assembly of short sequence reads.2018-02-24T15:02:12Z
methylpy1.2.5bridges.psc.xsede.orgWhole genome bisulfite sequencing (WGBS-seq) and Nucleosome Occupancy and Methylome sequencing (NOMe-seq) data processing and analysis2018-02-24T15:02:12Z
metis5.0.2stampede.tacc.xsede.orgSerial graph partitioning and fill-reduction matrix ordering routines2018-01-29T21:56:50Z
metis5.0.2stampede2.tacc.xsede.orgSerial graph partitioning and fill-reduction matrix ordering routines2018-02-24T15:09:22Z
metis5.1.0_gnubridges.psc.xsede.org2018-02-24T15:02:12Z
miRDeep20.0.7comet.sdsc.xsede.org2018-02-24T15:01:01Z
migrate3.6.11comet.sdsc.xsede.orgloading intel and mvapich2_ib modules loading the mvapich2_ib module loading intel and mvapich2_ib modules2018-02-24T15:01:01Z
migrate3.6.8comet.sdsc.xsede.orgloading intel and mvapich2_ib modules loading the mvapich2_ib module loading intel and mvapich2_ib modules2018-02-24T15:01:01Z
minced0.2.0bridges.psc.xsede.orgMinCED is a program to find Clustered Regularly Interspaced Short Palindromic Repeats (CRISPRs) in full genomes or environmental datasets such as metagenomes2018-02-24T15:02:12Z
minimac20121116stampede.tacc.xsede.orgLow-memory Markov Chain-based haplotyper2018-01-29T21:56:50Z
mira4.0.2bridges.psc.xsede.orgMIRA - Sequence assembler and sequence mapping for whole genome shotgun and EST / RNASeq sequencing data. Can use Sanger, 454, Illumina and IonTorrent data. PacBio: CCS and error corrected data usable.2018-02-24T15:02:12Z
miso0.5.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
mkl11.1.2.144comet.sdsc.xsede.org2018-02-24T15:01:01Z
mkl11.2.2.164comet.sdsc.xsede.org2018-02-24T15:01:01Z
module-gitnonecomet.sdsc.xsede.org This module will set up an alias for easy anonymous check-out of this version of the environment modules package. \get-modules - retrieve modules sources for this version Version $version2018-02-24T15:01:01Z
module-infononecomet.sdsc.xsede.org This module returns all the various module-info values in whatever mode you use (except in `whatis' mode) Version $version2018-02-24T15:01:01Z
modulesnonecomet.sdsc.xsede.org modules - loads the modules software & application environment This adds $prefix/* to several of the environment variables. Version $version2018-02-24T15:01:01Z
molden5.0.7comet.sdsc.xsede.org2018-02-24T15:01:01Z
mono3.12.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
moosegit.20170622stampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
mothur1.38.1bridges.psc.xsede.orgSoftware for describing and comparing microbial communities2018-02-24T15:02:12Z
mpc1.0.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
mpfr3.1.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
mpigcc_mvapichbridges.psc.xsede.org2018-02-24T15:02:12Z
mpigcc_openmpibridges.psc.xsede.org2018-02-24T15:02:12Z
mpiintel_mpibridges.psc.xsede.org2018-02-24T15:02:12Z
mpiintel_mvapichbridges.psc.xsede.org2018-02-24T15:02:12Z
mpiintel_openmpibridges.psc.xsede.org2018-02-24T15:02:12Z
mpipgi_openmpibridges.psc.xsede.org2018-02-24T15:02:12Z
mpi-caffegit_bf17d5a4bridges.psc.xsede.org2018-02-24T15:02:12Z
mpi4py1.3.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
mpiblast1.6.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
mpip3.4.1stampede.tacc.xsede.orgLightweight, Scalable MPI Profiling2018-01-29T21:56:50Z
mrbayes3.2.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
mrbayes3.2.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
mrjob0.5.9bridges.psc.xsede.orgA python mapreduce framework.2018-02-24T15:02:12Z
mrjobdefaultbridges.psc.xsede.orgA python mapreduce framework.2018-02-24T15:02:12Z
mummer3.23bridges.psc.xsede.org2018-02-24T15:02:12Z
mummer3.23stampede.tacc.xsede.orgMUMmer - A modular system for the rapid whole genome alignment of finished or draft sequence2018-01-29T21:56:50Z
mummer3.23stampede2.tacc.xsede.orgMUMmer - A modular system for the rapid whole genome alignment of finished or draft sequence2018-02-24T15:09:22Z
mumps4.10stampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
mumps4.10-complexstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
mumps4.10-complexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
mumps4.10-cxxstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
mumps4.10-cxxcomplexstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
mumps4.10-cxxcomplexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
mumps4.10-cxxdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
mumps4.10-debugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
mumps4.10.0stampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
mumps4.10.0-complexstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
mumps4.10.0-complexdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
mumps4.10.0-cxxstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
mumps4.10.0-cxxcomplexstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
mumps4.10.0-cxxcomplexdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
mumps4.10.0-cxxdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
mumps4.10.0-debugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
mumps5.0.1-p1_gnu_openmpibridges.psc.xsede.org2018-02-24T15:02:12Z
muscle3.8.31stampede.tacc.xsede.orgPopular multiple alignment software2018-01-29T21:56:50Z
muscle3.8.31supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
mvapich22.0bmaverick.tacc.xsede.orgMPI-2 implementation for Infiniband2018-02-24T15:15:30Z
mvapich22.1stampede.tacc.xsede.orgMPI-2 implementation for Infiniband2018-01-29T21:56:50Z
mvapich22.1wrangler.tacc.xsede.orgMPI-2 implementation for Infiniband2018-02-24T14:49:23Z
mvapich22.3bstampede2.tacc.xsede.orgMPI-3.1 implementation for Infiniband2018-02-24T15:09:22Z
mvapich2_cce2.0.1_cray83xstream.stanford.xsede.org2018-02-24T15:09:06Z
mvapich2_gdr2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
mvapich2_gdr2.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
mvapich2_gnu2.0.1_gnu48xstream.stanford.xsede.org2018-02-24T15:09:06Z
mvapich2_ib2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
mxml2.9comet.sdsc.xsede.org2018-02-24T15:01:01Z
mycc2015-12-03bridges.psc.xsede.orgAutomated binning tool for metagenome sequence classification2018-02-24T15:02:12Z
namd2.10comet.sdsc.xsede.org2018-02-24T15:01:01Z
namd2.10stampede.tacc.xsede.orgScalable Molecular Dynamics software2018-01-29T21:56:50Z
namd2.10-mic_mpistampede.tacc.xsede.orgScalable Molecular Dynamics software2018-01-29T21:56:50Z
namd2.11stampede.tacc.xsede.orgScalable Molecular Dynamics software2018-01-29T21:56:50Z
namd2.11-gpu_smpstampede.tacc.xsede.orgScalable Molecular Dynamics software2018-01-29T21:56:50Z
namd2.11_cpubridges.psc.xsede.org2018-02-24T15:02:12Z
namd2.12comet.sdsc.xsede.org2018-02-24T15:01:01Z
namd2.12stampede2.tacc.xsede.org2018-02-24T15:09:22Z
namd2.12_cpubridges.psc.xsede.org2018-02-24T15:02:12Z
namd2.9comet.sdsc.xsede.org2018-02-24T15:01:01Z
namd2017_12_05stampede2.tacc.xsede.org2018-02-24T15:09:22Z
namdnamd_gpubridges.psc.xsede.org2018-02-24T15:02:12Z
namd_cpu2.11_cpubridges.psc.xsede.org2018-02-24T15:02:12Z
namd_cpu2.12_cpubridges.psc.xsede.org2018-02-24T15:02:12Z
ncl_ncarg6.2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
ncl_ncarg6.2.1stampede.tacc.xsede.orgA library of graphics utilites from the Natl. Center for Atmospheric Research.2018-01-29T21:56:50Z
ncl_ncarg6.3.0stampede2.tacc.xsede.orgA library of graphics utilites from the Natl. Center for Atmospheric Research.2018-02-24T15:09:22Z
ncl_ncarg6.4.0bridges.psc.xsede.org2018-02-24T15:02:12Z
ncl_ncarg6.4.0maverick.tacc.xsede.orgA library of graphics utilites from the Natl. Center for Atmospheric Research.2018-02-24T15:15:30Z
nco4.5.2stampede.tacc.xsede.orgPrograms for manipulating and analyzing NetCDF files2018-01-29T21:56:50Z
nco4.5.4maverick.tacc.xsede.orgPrograms for manipulating and analyzing NetCDF files2018-02-24T15:15:30Z
nco4.6.3stampede2.tacc.xsede.orgPrograms for manipulating and analyzing NetCDF files2018-02-24T15:09:22Z
ncview2.1.5stampede.tacc.xsede.orgVisualization program for NetCDF files2018-01-29T21:56:50Z
ncview2.1.7comet.sdsc.xsede.org2018-02-24T15:01:01Z
ncview2.1.7stampede2.tacc.xsede.orgVisualization program for NetCDF files2018-02-24T15:09:22Z
netcdf3.6.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
netcdf3.6.2-gccbridges.psc.xsede.org2018-02-24T15:02:12Z
netcdf3.6.2-iccbridges.psc.xsede.org2018-02-24T15:02:12Z
netcdf4.2.1.1maverick.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets.2018-02-24T15:15:30Z
netcdf4.3.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
netcdf4.3.2wrangler.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets (Serial Version).2018-02-24T14:49:23Z
netcdf4.3.3.1stampede.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets (Serial Version).2018-01-29T21:56:50Z
netcdf4.3.3.1stampede2.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets (Serial Version).2018-02-24T15:09:22Z
netcdf4.4.1.1-gccbridges.psc.xsede.org2018-02-24T15:02:12Z
netcdf4.4.1.1-iccbridges.psc.xsede.org2018-02-24T15:02:12Z
netcdf4.4.4-fortran-gccbridges.psc.xsede.org2018-02-24T15:02:12Z
netcdf4.4.4-fortran-iccbridges.psc.xsede.org2018-02-24T15:02:12Z
neuron7.4bridges.psc.xsede.org2018-02-24T15:02:12Z
newbler2.6stampede.tacc.xsede.orgNewbler is a software package for de novo DNA sequence assembly. It is designed specifically for assembling sequence data generated by the 454 GS-series of pyrosequencing platforms sold by 454 Life Sciences, a Roche Diagnostics company.2018-01-29T21:56:50Z
ngscheckmate2016.10.12bridges.psc.xsede.orgMEGAN alignment tool, is a blast-like sequence alignment and analysis tool designed for processing high-throughput sequencing data, especially in the context of metagenomics.2018-02-24T15:02:12Z
ninja1.2.2stampede.tacc.xsede.orgNinja - a software for large-scale neighbor-joining phylogeny inference2018-01-29T21:56:50Z
node0.12.6comet.sdsc.xsede.org2018-02-24T15:01:01Z
novoalign3.02.02stampede.tacc.xsede.orgnovoalign - Aligner for short nucleotide space reads.2018-01-29T21:56:51Z
nullnonecomet.sdsc.xsede.org This module does absolutely nothing. It's meant simply as a place holder in your dot file initialization. Version $version2018-02-24T15:01:01Z
nwchem6.5stampede.tacc.xsede.orgGeneral computational chemistry package (quantum chemistry and molecular dynamics)2018-01-29T21:56:50Z
nwchem6.6bridges.psc.xsede.org2018-02-24T15:02:12Z
nwchem6.6comet.sdsc.xsede.org2018-02-24T15:01:01Z
nwchem6.6stampede.tacc.xsede.orgGeneral computational chemistry package (quantum chemistry and molecular dynamics)2018-01-29T21:56:50Z
nwchem6.6stampede2.tacc.xsede.orgNWChem aims to provide its users with computational chemistry tools that are scalable both in their ability to treat large scientific computational chemistry problems efficiently, and in their use of available parallel computing resources from high-performance parallel supercomputers to conventional workstation clusters.2018-02-24T15:09:22Z
nwchem6.8stampede2.tacc.xsede.orgNWChem aims to provide its users with computational chemistry tools that are scalable both in their ability to treat large scientific computational chemistry problems efficiently, and in their use of available parallel computing resources from high-performance parallel supercomputers to conventional workstation clusters.2018-02-24T15:09:22Z
oases0.2.08stampede.tacc.xsede.orgDe novo transcriptome assembler for very short reads2018-01-29T21:56:51Z
octave3.6.1stampede.tacc.xsede.orgis a high-level language, primarily intended for numerical computations.2018-01-29T21:56:51Z
octave4.2.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
opari21.0.7stampede.tacc.xsede.orgOMP instrumenter2018-01-29T21:56:50Z
openacc2016xstream.stanford.xsede.orgOpenACC Toolkit 20162018-02-24T15:09:07Z
openbabel2.3.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
openbabel2.3.2stampede.tacc.xsede.orgopenbabal - chemical toolbox designed to speak the many languages of chemical data2018-01-29T21:56:51Z
openbabel2.4.1stampede2.tacc.xsede.orgOpen Babel is an open source chemistry toolbox2018-02-24T15:09:22Z
openblas0.2.19bridges.psc.xsede.org2018-02-24T15:02:12Z
opencv2.4.13.2bridges.psc.xsede.org2018-02-24T15:02:12Z
opencv2.4.6.1stampede.tacc.xsede.organ imaging library2018-01-29T21:56:50Z
opencv2.4.6.1wrangler.tacc.xsede.organ imaging library2018-02-24T14:49:23Z
opencv3.2.0bridges.psc.xsede.org2018-02-24T15:02:12Z
opencvopencvbridges.psc.xsede.org2018-02-24T15:02:12Z
openfoam2.3.0bridges.psc.xsede.org2018-02-24T15:02:12Z
openfoam2.4.0stampede.tacc.xsede.orgOpenFOAM 2.4.02018-01-29T21:56:50Z
openfoam4.1stampede2.tacc.xsede.orgOpenFOAM 4.12018-02-24T15:09:22Z
openkim1.1.1stampede.tacc.xsede.orgKnowledgebase of Interatomic Models2018-01-29T21:56:50Z
openkim1.2.2stampede.tacc.xsede.orgKnowledgebase of Interatomic Models2018-01-29T21:56:50Z
openmpi_ib1.8.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
openslide3.4.1bridges.psc.xsede.orgA library that provides an interface to read whole-slide images.2018-02-24T15:02:12Z
ospray1.3.1maverick.tacc.xsede.org2018-02-24T15:15:30Z
ospray1.4.3stampede2.tacc.xsede.org2018-02-24T15:09:22Z
p3dfft2.7.1stampede.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2018-01-29T21:56:50Z
p3dfft2.7.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
p3dfft2.7.5stampede2.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2018-02-24T15:09:22Z
p4est1.1stampede.tacc.xsede.orgoctree support for dealii2018-01-29T21:56:50Z
p4est2.0stampede2.tacc.xsede.orgoctree support for dealii2018-02-24T15:09:22Z
pacman3.29maverick.tacc.xsede.orgTeraGrid Pacman utility2018-02-24T15:15:30Z
pacman3.29stampede.tacc.xsede.orgTeraGrid Pacman utility2018-01-29T21:56:50Z
pacman3.29wrangler.tacc.xsede.orgTeraGrid Pacman utility2018-02-24T14:49:23Z
pacman3.29-r3supermic.cct-lsu.xsede.orgTeraGrid Pacman utility2018-02-24T15:22:56Z
paml4.9abridges.psc.xsede.org2018-02-24T15:02:12Z
pandoc1.17.2bridges.psc.xsede.org2018-02-24T15:02:12Z
papi4.4.0stampede.tacc.xsede.orgInterface to monitor performance counter hardware for quantifying application behavior2018-01-29T21:56:51Z
papi5.3.0stampede.tacc.xsede.orgInterface to monitor performance counter hardware for quantifying application behavior2018-01-29T21:56:51Z
papi5.4.0.1xstream.stanford.xsede.org2018-02-24T15:09:07Z
papi5.4.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
papi5.4.3bridges.psc.xsede.org2018-02-24T15:02:12Z
papi5.5.1stampede2.tacc.xsede.orgInterface to monitor performance counter hardware for quantifying application behavior2018-02-24T15:09:22Z
papi5.6.0stampede2.tacc.xsede.orgInterface to monitor performance counter hardware for quantifying application behavior2018-02-24T15:09:22Z
parallel-netcdf4.3.2wrangler.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets (Parallel Version).2018-02-24T14:49:23Z
parallel-netcdf4.3.3.1stampede.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets (Parallel Version).2018-01-29T21:56:50Z
parallel-netcdf4.3.3.1stampede2.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets (Parallel Version).2018-02-24T15:09:22Z
parallel-netcdf4.4.1.1wrangler.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets (Parallel Version).2018-02-24T14:49:23Z
parallel_studio_xe2017.4.056bridges.psc.xsede.org2018-02-24T15:02:12Z
paraview4.3.1maverick.tacc.xsede.orga parallel interactive visualization system2018-02-24T15:15:30Z
paraview4.3.1stampede.tacc.xsede.orga parallel interactive visualization system2018-01-29T21:56:50Z
paraview5.2.0stampede.tacc.xsede.orga parallel interactive visualization system2018-01-29T21:56:50Z
paraview5.4.1stampede2.tacc.xsede.org2018-02-24T15:09:22Z
paraview-osmesa5.4.1stampede2.tacc.xsede.org2018-02-24T15:09:22Z
parmetis4.0.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
parmetis4.0.3_gnu_openmpibridges.psc.xsede.org2018-02-24T15:02:12Z
parmetis_petsc4.0stampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
parmetis_petsc4.0-complexstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
parmetis_petsc4.0-complexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
parmetis_petsc4.0-cxxstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
parmetis_petsc4.0-cxxcomplexstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
parmetis_petsc4.0-cxxcomplexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
parmetis_petsc4.0-cxxdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
parmetis_petsc4.0-debugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
parseltongue2.1bridges.psc.xsede.org2018-02-24T15:02:12Z
pbjelly15.8.24bridges.psc.xsede.org2018-02-24T15:02:12Z
pdt3.20comet.sdsc.xsede.org2018-02-24T15:01:01Z
pdtoolkit3.24stampede2.tacc.xsede.orgInstruments code for TAU profiling and tracing2018-02-24T15:09:22Z
pedcheck1.00stampede.tacc.xsede.orgpedcheck - Program for detecting marker typing incompatibilities in pedigree data2018-01-29T21:56:51Z
perfexpert4.1.1stampede.tacc.xsede.orgAn Easy-to-Use Automatic Performance Diagnosis and Optimization Tool for HPC Applications2018-01-29T21:56:50Z
perftools6.2.3xstream.stanford.xsede.org2018-02-24T15:09:07Z
perftools-lite6.2.3xstream.stanford.xsede.org2018-02-24T15:09:07Z
perl5.16.2stampede.tacc.xsede.orgPerl2018-01-29T21:56:50Z
perl5.18.4-threadsbridges.psc.xsede.org2018-02-24T15:02:12Z
perl5.22.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
perl5.24.0-threadsbridges.psc.xsede.org2018-02-24T15:02:12Z
petsc3.5maverick.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T15:15:30Z
petsc3.5stampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.5wrangler.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T14:49:23Z
petsc3.5-complexmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T15:15:30Z
petsc3.5-complexstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.5-complexwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T14:49:23Z
petsc3.5-complexdebugmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T15:15:30Z
petsc3.5-complexdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.5-complexdebugwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T14:49:23Z
petsc3.5-cxxmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T15:15:30Z
petsc3.5-cxxstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.5-cxxwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T14:49:23Z
petsc3.5-cxxcomplexmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T15:15:30Z
petsc3.5-cxxcomplexstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.5-cxxcomplexwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T14:49:23Z
petsc3.5-cxxcomplexdebugmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T15:15:30Z
petsc3.5-cxxcomplexdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.5-cxxcomplexdebugwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T14:49:23Z
petsc3.5-cxxdebugmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T15:15:30Z
petsc3.5-cxxdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.5-cxxdebugwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T14:49:23Z
petsc3.5-debugmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T15:15:30Z
petsc3.5-debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.5-debugwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T14:49:23Z
petsc3.5-singlestampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.5-singlewrangler.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T14:49:23Z
petsc3.5-unimaverick.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T15:15:30Z
petsc3.5-unistampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.5-uniwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T14:49:23Z
petsc3.5-unidebugmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T15:15:30Z
petsc3.5-unidebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.5-unidebugwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2018-02-24T14:49:23Z
petsc3.6stampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-complexstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-complexdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-cxxstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-cxxcomplexstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-cxxcomplexdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-cxxdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-cxxi64stampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-cxxi64debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-i64stampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-i64debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-singlestampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-unistampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6-unidebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.6.1bridges.psc.xsede.org2018-02-24T15:02:12Z
petsc3.6.1-intelbridges.psc.xsede.org2018-02-24T15:02:12Z
petsc3.6.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
petsc3.7stampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7stampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-complexstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-complexstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-complexdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-complexdebugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-cxxstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-cxxstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-cxxcomplexstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-cxxcomplexstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-cxxcomplexdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-cxxcomplexdebugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-cxxdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-cxxdebugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-cxxi64stampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-cxxi64stampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-cxxi64debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-cxxi64debugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-debugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-i64stampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-i64stampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-i64debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-i64debugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-singlestampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-singlestampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-unistampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-unistampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7-unidebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2018-01-29T21:56:50Z
petsc3.7-unidebugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
petsc3.7.4_gnu_openmpibridges.psc.xsede.org2018-02-24T15:02:12Z
pflotrandev20150522stampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
pgi14.10supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
pgi14.3supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
pgi15.10supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
pgi15.4supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
pgi16.10bridges.psc.xsede.org2018-02-24T15:02:12Z
pgi16.3bridges.psc.xsede.org2018-02-24T15:02:12Z
pgi16.5supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
pgi17.10supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
pgi17.4xstream.stanford.xsede.orgPGI compilers - C, C++ and Fortran compilers from The Portland Group - PGI - Homepage: http://www.pgroup.com/2018-02-24T15:09:07Z
pgi17.5bridges.psc.xsede.org2018-02-24T15:02:12Z
pgi17.5comet.sdsc.xsede.orgUnloading compiler-dependent module $app2018-02-24T15:01:01Z
pgi18.1supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
phdf51.10.1wrangler.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Parallel Version).2018-02-24T14:49:23Z
phdf51.10.1_intelbridges.psc.xsede.org2018-02-24T15:02:12Z
phdf51.8.14wrangler.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Parallel Version).2018-02-24T14:49:23Z
phdf51.8.16stampede.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Parallel Version).2018-01-29T21:56:50Z
phdf51.8.16stampede2.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Parallel Version).2018-02-24T15:09:22Z
phdf51.8.16_gnu_openmpibridges.psc.xsede.org2018-02-24T15:02:12Z
phdf51.8.16_intelbridges.psc.xsede.org2018-02-24T15:02:12Z
phylosift1.0.1bridges.psc.xsede.org2018-02-24T15:02:12Z
phyutility2.2.6stampede.tacc.xsede.orgphyutility - Program to manipulate phylogenetic trees2018-01-29T21:56:51Z
picard1.83stampede.tacc.xsede.orgPicard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported.2018-01-29T21:56:51Z
picard1.92stampede.tacc.xsede.orgPicard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported.2018-01-29T21:56:51Z
picard1.98stampede.tacc.xsede.orgPicard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported.2018-01-29T21:56:51Z
picard2.1.1bridges.psc.xsede.org2018-02-24T15:02:12Z
picard2.11.0stampede2.tacc.xsede.orgPicard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported.2018-02-24T15:09:22Z
picard2.17.0bridges.psc.xsede.org2018-02-24T15:02:12Z
picard2.3.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
pigz2.3.4supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
pilon1.16bridges.psc.xsede.org2018-02-24T15:02:12Z
platanus1.2.4bridges.psc.xsede.orgPlatanus is a de novo sequence assembler for NGS data.2018-02-24T15:02:12Z
plink1.07stampede.tacc.xsede.orgplink - Whole genome association analysis toolset2018-01-29T21:56:51Z
plink1.9comet.sdsc.xsede.org2018-02-24T15:01:01Z
plinkseq0.10bridges.psc.xsede.orgPLINK/SEQ is an open-source C/C++ library for working with human genetic variation data2018-02-24T15:02:12Z
plumed2.4abridges.psc.xsede.orgPLUMED is an open source library for free energy calculations in molecular systems which works together with some of the most popular molecular dynamics engines.2018-02-24T15:02:12Z
pmetis4.0.2stampede.tacc.xsede.orgParallel graph partitioning and fill-reduction matrix ordering routines2018-01-29T21:56:50Z
pnetcdf1.6.1stampede.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets(PnetCDF).2018-01-29T21:56:50Z
pnetcdf1.8.1stampede2.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets(PnetCDF).2018-02-24T15:09:22Z
png1.6.21bridges.psc.xsede.org2018-02-24T15:02:12Z
polymake2.14comet.sdsc.xsede.org2018-02-24T15:01:01Z
povray3.7.0.RC7stampede.tacc.xsede.orgPersistence of Vision Raytracer2018-01-29T21:56:50Z
pplacer1.1alpha17bridges.psc.xsede.orgSuite of programs for analyzing phylogenetic trees2018-02-24T15:02:12Z
primer31.1.4bridges.psc.xsede.org2018-02-24T15:02:12Z
primer32.2.3bridges.psc.xsede.org2018-02-24T15:02:12Z
primer32.3.7bridges.psc.xsede.org2018-02-24T15:02:12Z
prodigal2.6.2bridges.psc.xsede.orgProdigal is a program for protein-coding gene prediction for prokaryotic genomes.2018-02-24T15:02:12Z
prodigal2.6.3bridges.psc.xsede.orgProdigal is a program for protein-coding gene prediction for prokaryotic genomes.2018-02-24T15:02:12Z
proj4.9.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
prokka1.11bridges.psc.xsede.orgA software tool for the rapid annotation of prokaryotic genomes.2018-02-24T15:02:12Z
protobuf3.2.0bridges.psc.xsede.org2018-02-24T15:02:12Z
psi41.0.0bridges.psc.xsede.org2018-02-24T15:02:12Z
pylauncher2.0stampede.tacc.xsede.orgflexible parametric job launcher2018-01-29T21:56:51Z
pylauncher2.1maverick.tacc.xsede.orgflexible parametric job launcher2018-02-24T15:15:30Z
pylauncher2.1stampede.tacc.xsede.orgflexible parametric job launcher2018-01-29T21:56:51Z
pylauncher2.1wrangler.tacc.xsede.orgflexible parametric job launcher2018-02-24T14:49:23Z
pylauncher2.5stampede2.tacc.xsede.org2018-02-24T15:09:22Z
pyrosetta2013wk43stampede.tacc.xsede.orgThe premier software suite for macromolecular modeling2018-01-29T21:56:51Z
pyrosetta3.6stampede.tacc.xsede.orgThe premier software suite for macromolecular modeling2018-01-29T21:56:51Z
pysam0.8.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
python2.7.10comet.sdsc.xsede.org2018-02-24T15:01:01Z
python2.7.10-mkl-micsupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
python2.7.11_gccbridges.psc.xsede.orgThis version of python provides python 2.7.11, including numpy, scipy, matplotlib, nose and cutadapt.2018-02-24T15:02:12Z
python2.7.11_gcc_np1.11bridges.psc.xsede.org2018-02-24T15:02:12Z
python2.7.12stampede.tacc.xsede.orgscientific scripting package2018-01-29T21:56:50Z
python2.7.13stampede2.tacc.xsede.org2018-02-24T15:09:22Z
python2.7.13stampede2.tacc.xsede.orgscientific scripting package2018-02-24T15:09:22Z
python2.7.13wrangler.tacc.xsede.org2018-02-24T14:49:23Z
python2.7.13wrangler.tacc.xsede.orgscientific scripting package2018-02-24T14:49:23Z
python2.7.13-anaconda-tensorflowsupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
python2.7.14_gcc5_np1.13bridges.psc.xsede.org2018-02-24T15:02:12Z
python2.7.14_gcc_np1.13bridges.psc.xsede.org2018-02-24T15:02:12Z
python2.7.14_icc_np1.13bridges.psc.xsede.org2018-02-24T15:02:12Z
python2.7.3-epd-7.3.2stampede.tacc.xsede.orginterpreted programming language2018-01-29T21:56:50Z
python2.7.6maverick.tacc.xsede.orgscientific scripting package2018-02-24T15:15:30Z
python2.7.7-anacondasupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
python2.7.9wrangler.tacc.xsede.orgscientific scripting package2018-02-24T14:49:23Z
python2.7.9wrangler.tacc.xsede.orgscientific scripting package2018-02-24T14:49:23Z
python3.4.2bridges.psc.xsede.org2018-02-24T15:02:12Z
python3.6.2-anaconda-tensorflowsupermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
pythonintel_2.7.12bridges.psc.xsede.org2018-02-24T15:02:12Z
pythonintel_2.7.13bridges.psc.xsede.org2018-02-24T15:02:12Z
python22.7.11_gccbridges.psc.xsede.org2018-02-24T15:02:12Z
python22.7.11_gcc_np1.11bridges.psc.xsede.org2018-02-24T15:02:12Z
python22.7.14_gcc5_np1.13bridges.psc.xsede.org2018-02-24T15:02:12Z
python2intel_2.7.12bridges.psc.xsede.org2018-02-24T15:02:12Z
python2intel_2.7.13bridges.psc.xsede.org2018-02-24T15:02:12Z
python33.4.2bridges.psc.xsede.org2018-02-24T15:02:12Z
python33.5.2_gcc_mklbridges.psc.xsede.org2018-02-24T15:02:12Z
python33.6.3stampede2.tacc.xsede.org2018-02-24T15:09:22Z
python33.6.3stampede2.tacc.xsede.orgscientific scripting package2018-02-24T15:09:22Z
python3intel_3.5.2bridges.psc.xsede.org2018-02-24T15:02:12Z
python3intel_3.6.2bridges.psc.xsede.org2018-02-24T15:02:12Z
pytorch0.1.5bridges.psc.xsede.org2018-02-24T15:02:12Z
pytorch0.2.0xstream.stanford.xsede.orgTensors and Dynamic neural networks in Python with strong GPU acceleration (foss/2015.05 CUDA/8.0.44 cuDNN/5.1-CUDA-8.0.44 Python/2.7.9 MAGMA/2.2.0)2018-02-24T15:09:07Z
pytorch0.3.1xstream.stanford.xsede.orgTensors and Dynamic neural networks in Python with strong GPU acceleration (foss/2015.05 CUDA/8.0.44 cuDNN/5.1-CUDA-8.0.44 Python/2.7.9 MAGMA/2.2.0)2018-02-24T15:09:07Z
pytorch0.3.1-cp36xstream.stanford.xsede.orgTensors and Dynamic neural networks in Python with strong GPU acceleration (foss/2015.05 CUDA/8.0.44 cuDNN/5.1-CUDA-8.0.44 Python/3.6.0 MAGMA/2.2.0)2018-02-24T15:09:07Z
pytorchdefaultxstream.stanford.xsede.orgTensors and Dynamic neural networks in Python with strong GPU acceleration (foss/2015.05 CUDA/8.0.44 cuDNN/5.1-CUDA-8.0.44 Python/2.7.9 MAGMA/2.2.0)2018-02-24T15:09:07Z
qchem5.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
qe5.3.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
qe6.0stampede.tacc.xsede.orgintegrated suite of computer codes for electronic structure calculations and material modeling at the nanoscale.2018-01-29T21:56:50Z
qe6.2stampede2.tacc.xsede.orgIntegrated suite of computer codes for electronic structure calculations and material modeling at the nanoscale.2018-02-24T15:09:22Z
qe6.2.1stampede2.tacc.xsede.orgIntegrated suite of computer codes for electronic structure calculations and material modeling at the nanoscale.2018-02-24T15:09:22Z
qiime1.9.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
qorts44ab10dbridges.psc.xsede.orgThe QoRTs software package is a fast, efficient, and portable multifunction toolkit designed to assist in the analysis, quality control, and data management of RNA-Seq datasets.2018-02-24T15:02:12Z
qt4.8.4maverick.tacc.xsede.orga visual widget library for UI construction2018-02-24T15:15:30Z
qt4.8.4stampede.tacc.xsede.orga visual widget library for UI construction2018-01-29T21:56:51Z
qt5.5.1stampede.tacc.xsede.orga visual widget library for UI construction2018-01-29T21:56:51Z
qt44.8.7stampede2.tacc.xsede.org2018-02-24T15:09:22Z
qt55.9.4stampede2.tacc.xsede.org2018-02-24T15:09:22Z
randfold2.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
rapidminer7.1.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
raxml8.1.24comet.sdsc.xsede.org2018-02-24T15:01:01Z
raxml8.2.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
raxml8.2.9bridges.psc.xsede.org2018-02-24T15:02:12Z
ray2.3.1bridges.psc.xsede.org2018-02-24T15:02:12Z
relion1.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
relion2.1bridges.psc.xsede.orgRELION (for REgularised LIkelihood OptimisatioN, pronounce rely-on) is a stand-alone computer program that employs an empirical Bayesian approach to refinement of (multiple) 3D reconstructions or 2D class averages in electron cryo-microscopy (cryo-EM).2018-02-24T15:02:12Z
remora1.0.0stampede.tacc.xsede.org2018-01-29T21:56:50Z
remora1.5stampede.tacc.xsede.orgREsource MOnitoring for Remote Applications2018-01-29T21:56:50Z
remora1.7maverick.tacc.xsede.orgREsource MOnitoring for Remote Applications2018-02-24T15:15:30Z
remora1.7stampede.tacc.xsede.orgREsource MOnitoring for Remote Applications2018-01-29T21:56:50Z
remora1.8supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
remora1.8.1stampede2.tacc.xsede.orgREsource MOnitoring for Remote Applications2018-02-24T15:09:22Z
remora1.8.1stampede2.tacc.xsede.orgREsource MOnitoring for Remote Applications2018-02-24T15:09:22Z
repeatmasker4.0.6bridges.psc.xsede.orgRepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences2018-02-24T15:02:12Z
rnammer1.2bridges.psc.xsede.org2018-02-24T15:02:12Z
rnnotator3.4.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
root5.34.14stampede.tacc.xsede.orgRoot -- a set of OO frameworks with all the functionality needed to handle and analyze large amounts of data in a very efficient way2018-01-29T21:56:51Z
rosetta3.5stampede.tacc.xsede.orgThe premier software suite for macromolecular modeling2018-01-29T21:56:50Z
rosetta3.7bridges.psc.xsede.org2018-02-24T15:02:12Z
rosetta3.7stampede.tacc.xsede.orgThe premier software suite for macromolecular modeling2018-01-29T21:56:50Z
rosetta3.8stampede2.tacc.xsede.orgThe premier software suite for macromolecular modeling2018-02-24T15:09:22Z
rsem1.2.21bridges.psc.xsede.org2018-02-24T15:02:12Z
rseqc2.6.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
rstudio1.1bridges.psc.xsede.org2018-02-24T15:02:12Z
rum2.0.5stampede.tacc.xsede.orgRUM - RNAseq Unified Mapper2018-01-29T21:56:51Z
rum2.0.5supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
sabre1.00stampede.tacc.xsede.orgbarcode demultiplexing and trimming tool for FastQ files2018-01-29T21:56:50Z
sailfish0.9.2bridges.psc.xsede.org2018-02-24T15:02:12Z
salmon0.6.0bridges.psc.xsede.org2018-02-24T15:02:12Z
salmon0.7.2bridges.psc.xsede.org2018-02-24T15:02:12Z
salmon0.8.1bridges.psc.xsede.org2018-02-24T15:02:12Z
samtools0.1.19bridges.psc.xsede.org2018-02-24T15:02:12Z
samtools0.1.19stampede.tacc.xsede.orgSAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format.2018-01-29T21:56:51Z
samtools1.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
samtools1.2stampede.tacc.xsede.orgSAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format.2018-01-29T21:56:51Z
samtools1.3bridges.psc.xsede.org2018-02-24T15:02:12Z
samtools1.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
samtools1.3stampede.tacc.xsede.orgSamtools is a suite of programs for interacting with high-throughput sequencing data.2018-01-29T21:56:51Z
samtools1.3wrangler.tacc.xsede.orgSamtools is a suite of programs for interacting with high-throughput sequencing data.2018-02-24T14:49:23Z
samtools1.3.1bridges.psc.xsede.org2018-02-24T15:02:12Z
samtools1.5stampede2.tacc.xsede.orgTools (written in C using htslib) for manipulating next-generation sequencing data2018-02-24T15:09:22Z
samtools1.6wrangler.tacc.xsede.orgTools (written in C using htslib) for manipulating next-generation sequencing data2018-02-24T14:49:23Z
sanitytool1.1stampede.tacc.xsede.org2018-01-29T21:56:51Z
sanitytool1.3maverick.tacc.xsede.org2018-02-24T15:15:30Z
sanitytool1.3stampede.tacc.xsede.org2018-01-29T21:56:51Z
sanitytool1.4stampede2.tacc.xsede.org2018-02-24T15:09:22Z
sanitytool1.5stampede2.tacc.xsede.org2018-02-24T15:09:22Z
scalapack2.0.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
scikitlearn_0.17.1_image_0.12.3bridges.psc.xsede.org2018-02-24T15:02:12Z
scikitpy2.7.14_gcc5_np1.13bridges.psc.xsede.org2018-02-24T15:02:12Z
scipy2.7comet.sdsc.xsede.org2018-02-24T15:01:01Z
scons2.3.0stampede.tacc.xsede.orgSCons is a software construction tool (build tool, or make tool) implemented in Python, that uses Python scripts as *configuration files* for software builds. Based on the design that won the Software Carpentry build tool competition, SCons solves a number of problems associated with other build tools, especially including the classic and ubiquitous Make itself.2018-01-29T21:56:51Z
scotch6.0.0_intelbridges.psc.xsede.org2018-02-24T15:02:12Z
scotch6.0.4_gnu_openmpibridges.psc.xsede.org2018-02-24T15:02:12Z
scripture07092012stampede.tacc.xsede.org2018-01-29T21:56:51Z
scythe0.95stampede.tacc.xsede.orgA very simple 3' adapter trimmer2018-01-29T21:56:50Z
scythe0.981bridges.psc.xsede.org2018-02-24T15:02:12Z
seqtk1.2-r94bridges.psc.xsede.org2018-02-24T15:02:12Z
settarg6.0.15xstream.stanford.xsede.org2018-02-24T15:09:07Z
settarg7.4.1stampede.tacc.xsede.orgA dynamic environment system based on Lmod2018-01-29T21:56:50Z
settarg7.7wrangler.tacc.xsede.orgA dynamic environment system based on Lmod2018-02-24T14:49:23Z
settarg7.7.1maverick.tacc.xsede.org2018-02-24T15:15:30Z
settarg7.7.3stampede2.tacc.xsede.org2018-02-24T15:09:22Z
shannon2017-05-10bridges.psc.xsede.orgA program for assembling transcripts from RNA-Seq data using an information-theoretic approach.2018-02-24T15:02:12Z
sickle1.2stampede.tacc.xsede.orgA windowed adaptive trimming tool for FASTQ files using quality2018-01-29T21:56:50Z
sickle1.33bridges.psc.xsede.org2018-02-24T15:02:12Z
siesta3.2stampede.tacc.xsede.orgSpanish Initiative for Electronic Simulations with Thousands of Atoms2018-01-29T21:56:50Z
siesta4.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
siesta4.0stampede2.tacc.xsede.orgSpanish Initiative for Electronic Simulations with Thousands of Atoms2018-02-24T15:09:22Z
signalp4.1cbridges.psc.xsede.org2018-02-24T15:02:12Z
silo4.10stampede.tacc.xsede.orga scalable mesh and field I/O library and scientific database2018-01-29T21:56:50Z
silo4.10.2stampede2.tacc.xsede.orga scalable mesh and field I/O library and scientific database2018-02-24T15:09:22Z
singularity2.1stampede.tacc.xsede.orgSingularity is an open-source software container platform.2018-01-29T21:56:51Z
singularity2.3bridges.psc.xsede.orgSingularity HPC container software2018-02-24T15:02:12Z
singularity2.3.1xstream.stanford.xsede.orgSingularity: Application containers for Linux2018-02-24T15:09:07Z
singularity2.3.2bridges.psc.xsede.orgSingularity HPC container software2018-02-24T15:02:12Z
singularity2.3.2comet.sdsc.xsede.org Version $singularityversion2018-02-24T15:01:01Z
singularity2.4bridges.psc.xsede.orgSingularity HPC container software2018-02-24T15:02:12Z
singularity2.4.2bridges.psc.xsede.orgSingularity HPC container software2018-02-24T15:02:12Z
slepc3.5stampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.5-complexstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.5-complexdebugstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.5-cxxstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.5-cxxcomplexstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.5-cxxcomplexdebugstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.5-cxxdebugstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.5-debugstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6stampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-complexstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-complexdebugstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-cxxstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-cxxcomplexstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-cxxcomplexdebugstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-cxxdebugstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-cxxi64stampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-cxxi64debugstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-debugstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-i64stampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-i64debugstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-singlestampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-unistampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6-unidebugstampede.tacc.xsede.orgLibrary of eigensolvers2018-01-29T21:56:50Z
slepc3.6.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
slepc3.7stampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7stampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-complexstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-complexstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-complexdebugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-complexdebugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-cxxstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-cxxstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-cxxcomplexstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-cxxcomplexstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-cxxcomplexdebugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-cxxcomplexdebugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-cxxdebugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-cxxdebugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-cxxi64stampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-cxxi64stampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-cxxi64debugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-cxxi64debugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-debugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-debugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-i64stampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-i64stampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-i64debugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-i64debugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-singlestampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-singlestampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-unistampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-unistampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
slepc3.7-unidebugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2018-01-29T21:56:50Z
slepc3.7-unidebugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2018-02-24T15:09:22Z
snvmix0.11.8-r5bridges.psc.xsede.org2018-02-24T15:02:12Z
soapdenovo240comet.sdsc.xsede.org2018-02-24T15:01:01Z
soapdenovo22015-10-09bridges.psc.xsede.orgSOAPdenovo2 is a de novo assembler for next generation sequencing reads.2018-02-24T15:02:12Z
soapdenovo2r240stampede.tacc.xsede.orgsoapdenovo2 - novel short-read assembly method that can build a de novo draft assembly for the human-sized genomes2018-01-29T21:56:50Z
soaptrans1.01stampede.tacc.xsede.orgde novo transcriptome assembler basing on the SOAPdenovo2018-01-29T21:56:51Z
somaticsniper1.0.5bridges.psc.xsede.org2018-02-24T15:02:12Z
spades3.10.1bridges.psc.xsede.orgSt. Petersburg genome assembler - An assembly toolkit containing various assembly pipelines2018-02-24T15:02:12Z
spades3.10.1wrangler.tacc.xsede.orgSPAdes – St. Petersburg genome assembler2018-02-24T14:49:23Z
spades3.11.1bridges.psc.xsede.orgSt. Petersburg genome assembler - An assembly toolkit containing various assembly pipelines2018-02-24T15:02:12Z
spades3.8.1bridges.psc.xsede.orgSt. Petersburg genome assembler - An assembly toolkit containing various assembly pipelines2018-02-24T15:02:12Z
spades3.9.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
spark2.1.0bridges.psc.xsede.orgA big data processing framework.2018-02-24T15:02:12Z
spider21.01stampede.tacc.xsede.orgspider - an image processing system for electron microscopy2018-01-29T21:56:50Z
spider21.02stampede.tacc.xsede.orgspider - an image processing system for electron microscopy2018-01-29T21:56:50Z
sprng2.0bridges.psc.xsede.org2018-02-24T15:02:12Z
sprng2.0bcomet.sdsc.xsede.org2018-02-24T15:01:01Z
squid1.9gcomet.sdsc.xsede.org2018-02-24T15:01:01Z
sra-toolkit2.8.1-2bridges.psc.xsede.org2018-02-24T15:02:12Z
sratoolkit2.8.1stampede.tacc.xsede.orgThe SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives.2018-01-29T21:56:50Z
sratoolkit2.8.1wrangler.tacc.xsede.orgThe SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives.2018-02-24T14:49:23Z
sratoolkit2.8.2stampede2.tacc.xsede.orgThe SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives2018-02-24T15:09:22Z
stacks1.13stampede.tacc.xsede.orgStacks - short-read genomics pipeline2018-01-29T21:56:51Z
stacks1.37comet.sdsc.xsede.org2018-02-24T15:01:01Z
stampy1.0.22stampede.tacc.xsede.orgStampy - Illumina short reads mapper2018-01-29T21:56:51Z
star2.5.3astampede2.tacc.xsede.orgSpliced Transcripts Alignment to a Reference2018-02-24T15:09:22Z
star-fusion1.1.0bridges.psc.xsede.orgSTAR-Fusion uses the STAR aligner to identify candidate fusion transcripts supported by Illumina reads and maps junction reads and spanning reads to a reference annotation set.2018-02-24T15:02:12Z
staraligner2.5.2bbridges.psc.xsede.orgSpliced Transcripts Alignment to a Reference2018-02-24T15:02:12Z
strelka1.0.14bridges.psc.xsede.org2018-02-24T15:02:12Z
stringtie1.3.3bridges.psc.xsede.orgTranscript assembly and quantification for RNA-Seq2018-02-24T15:02:12Z
sundials2.5.0stampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
sundials2.5.0-complexstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
sundials2.5.0-complexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
sundials2.5.0-cxxstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
sundials2.5.0-cxxcomplexstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
sundials2.5.0-cxxcomplexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
sundials2.5.0-cxxdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
sundials2.5.0-debugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
sundials2.6.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
super-deduper7c48db4bridges.psc.xsede.orgA tool for removing PCR duplicates from sequencing data.2018-02-24T15:02:12Z
superlu3.3stampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
superlu3.3-complexstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
superlu3.3-complexdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
superlu3.3-cxxstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
superlu3.3-cxxcomplexstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
superlu3.3-cxxcomplexdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
superlu3.3-cxxdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
superlu3.3-debugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2018-01-29T21:56:50Z
superlu4.2comet.sdsc.xsede.org2018-02-24T15:01:01Z
superlu5.2.1stampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
superlu5.2.1-complexstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
superlu5.2.1-complexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
superlu5.2.1-cxxstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
superlu5.2.1-cxxcomplexstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
superlu5.2.1-cxxcomplexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
superlu5.2.1-cxxdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
superlu5.2.1-debugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
superlu_dist5.1.2_gnu_openmpibridges.psc.xsede.org2018-02-24T15:02:12Z
supernova2.0.0bridges.psc.xsede.orgA software package for de novo assembly from 10X Genomics Chromium Linked-Reads that are made from a single whole-genome library from an individual DNA source.2018-02-24T15:02:12Z
swift0.96.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
swig3.0.12stampede.tacc.xsede.orgSWIG is a software development tool that connects programs written in C and C++ with a variety of high-level programming languages.2018-01-29T21:56:51Z
swig3.0.12stampede2.tacc.xsede.orgSWIG is a software development tool that connects programs written in C and C++ with a variety of high-level programming languages.2018-02-24T15:09:22Z
swig3.0.5stampede.tacc.xsede.orgSWIG is a software development tool that connects programs written in C and C++ with a variety of high-level programming languages.2018-01-29T21:56:51Z
swig3.0.8bridges.psc.xsede.org2018-02-24T15:02:12Z
swr12.1stampede.tacc.xsede.org2018-01-29T21:56:51Z
swr13.0stampede.tacc.xsede.org2018-01-29T21:56:51Z
swr17.0maverick.tacc.xsede.org2018-02-24T15:15:30Z
swr17.0stampede.tacc.xsede.org2018-01-29T21:56:51Z
swr17.0wrangler.tacc.xsede.org2018-02-24T14:49:23Z
swr17.2.8stampede2.tacc.xsede.org2018-02-24T15:09:22Z
szip2.1bridges.psc.xsede.org2018-02-24T15:02:12Z
t3pio2.4stampede.tacc.xsede.orgParallel I/O tool2018-01-29T21:56:50Z
tabix0.2.6stampede.tacc.xsede.orgIndexes a tab-delimited genome position file in.tab.bgz and creates an index file.2018-01-29T21:56:50Z
tacc-singularity2.3.1maverick.tacc.xsede.orgApplication and environment virtualization2018-02-24T15:15:30Z
tacc-singularity2.3.1stampede2.tacc.xsede.orgApplication and environment virtualization2018-02-24T15:09:22Z
tacc-singularity2.3.1wrangler.tacc.xsede.orgApplication and environment virtualization2018-02-24T14:49:23Z
tacc_tips0.5maverick.tacc.xsede.orgTips generated at each login.2018-02-24T15:15:30Z
tacc_tips0.5stampede.tacc.xsede.orgTips generated at each login.2018-01-29T21:56:50Z
tacc_tips0.5stampede2.tacc.xsede.orgTips generated at each login.2018-02-24T15:09:22Z
tacc_tips0.5wrangler.tacc.xsede.orgTips generated at each login.2018-02-24T14:49:23Z
tau2.23comet.sdsc.xsede.org2018-02-24T15:01:01Z
tau2.24.1stampede.tacc.xsede.orgFramework for Application profiling and optimization2018-01-29T21:56:50Z
tau2.26.2p1stampede2.tacc.xsede.orgFramework for Application profiling and optimization2018-02-24T15:09:22Z
tau2.26.2p1_intelbridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow0.10xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/7.5.18 cuDNN/5.1)2018-02-24T15:09:07Z
tensorflow0.10.0bridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow0.10.0_nogpubridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow0.11xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/7.5.18 cuDNN/5.1)2018-02-24T15:09:07Z
tensorflow0.11.0bridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow0.11.0_nogpubridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow0.12.1bridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow0.12.1_nogpubridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow0.7.1bridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow0.7.1xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/7.5.18 cuDNN/4.0)2018-02-24T15:09:07Z
tensorflow0.7.1_nogpubridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow0.8xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/7.5.18 cuDNN/4.0)2018-02-24T15:09:07Z
tensorflow0.8.0bridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow0.8.0_nogpubridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow0.9xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/7.5.18 cuDNN/4.0)2018-02-24T15:09:07Z
tensorflow0.9.0bridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow0.9.0_nogpubridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow1.0.0xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/8.0.44 cuDNN/5.1 Python/2.7.9)2018-02-24T15:09:07Z
tensorflow1.0.0-cp36xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 Python/3.6.0 CUDA/8.0.44 cuDNN/5.1-CUDA-8.0.44)2018-02-24T15:09:07Z
tensorflow1.0.1bridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow1.0.1_anacondabridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow1.0.1_anaconda_nogpubridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow1.0.1_nogpubridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow1.1.0bridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow1.1.0xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/8.0.44 cuDNN/5.1 Python/2.7.9)2018-02-24T15:09:07Z
tensorflow1.1.0-cp36xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 Python/3.6.0 CUDA/8.0.44 cuDNN/5.1-CUDA-8.0.44)2018-02-24T15:09:07Z
tensorflow1.1.0_nogpubridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow1.4_gpubridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflow1.5.0xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/8.0.44 cuDNN/5.1 Python/2.7.9)2018-02-24T15:09:07Z
tensorflow1.5.0-cp36xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 Python/3.6.0 CUDA/8.0.44 cuDNN/5.1-CUDA-8.0.44)2018-02-24T15:09:07Z
tensorflow1.5_gpubridges.psc.xsede.org2018-02-24T15:02:12Z
tensorflowdefaultxstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/8.0.44 cuDNN/5.1 Python/2.7.9)2018-02-24T15:09:07Z
terachem1.9xstream.stanford.xsede.orgTeraChem is general purpose quantum chemistry software designed to run on NVIDIA GPU architectures under a 64-bit Linux operating system.2018-02-24T15:09:07Z
texlive2017stampede2.tacc.xsede.org2018-02-24T15:09:22Z
tginfo1.1.1maverick.tacc.xsede.orgTeraGrid Usage utility2018-02-24T15:15:30Z
tginfo1.1.1wrangler.tacc.xsede.orgTeraGrid Usage utility2018-02-24T14:49:23Z
tginfo1.1.3maverick.tacc.xsede.orgTeraGrid Usage utility2018-02-24T15:15:30Z
tginfo1.1.3wrangler.tacc.xsede.orgTeraGrid Usage utility2018-02-24T14:49:23Z
tginfo1.1.4supermic.cct-lsu.xsede.orgTeraGrid tgusage utility2018-02-24T15:22:56Z
tgproxy0.9.1maverick.tacc.xsede.orgTeraGrid Proxy utility2018-02-24T15:15:30Z
tgproxy0.9.1stampede.tacc.xsede.orgTeraGrid Proxy utility2018-01-29T21:56:50Z
tgproxy0.9.1wrangler.tacc.xsede.orgTeraGrid Proxy utility2018-02-24T14:49:23Z
tgresid2.3.4maverick.tacc.xsede.orgTeraGrid Resid utility2018-02-24T15:15:30Z
tgresid2.3.4stampede.tacc.xsede.orgTeraGrid Resid utility2018-01-29T21:56:50Z
tgresid2.3.4wrangler.tacc.xsede.orgTeraGrid Resid utility2018-02-24T14:49:23Z
tgusage3.0supermic.cct-lsu.xsede.orgTeraGrid tgusage utility2018-02-24T15:22:57Z
theano0.8.0bridges.psc.xsede.org2018-02-24T15:02:12Z
theano0.8.2bridges.psc.xsede.org2018-02-24T15:02:12Z
tiff4.0.6bridges.psc.xsede.org2018-02-24T15:02:12Z
tmhmm2.0cbridges.psc.xsede.org2018-02-24T15:02:12Z
tophat2.0.10stampede.tacc.xsede.orgTopHat2 is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons.2018-01-29T21:56:50Z
tophat2.0.12supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
tophat2.0.13stampede.tacc.xsede.orgTopHat2 is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons.2018-01-29T21:56:50Z
tophat2.0.8bstampede.tacc.xsede.orgTopHat2 is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons.2018-01-29T21:56:50Z
tophat2.1.0bridges.psc.xsede.orgA splice junction mapper for RNA-Seq reads2018-02-24T15:02:12Z
tophat2.1.1bridges.psc.xsede.orgA splice junction mapper for RNA-Seq reads2018-02-24T15:02:12Z
tophat2.1.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
tophat2.1.1stampede2.tacc.xsede.orgFast splice junction mapper for RNA-Seq reads2018-02-24T15:09:22Z
torch20160414-cbb5161xstream.stanford.xsede.orgTorch is a scientific computing framework with wide support for machine learning algorithms that puts GPUs first.2018-02-24T15:09:07Z
torch20160805-4bfc2daxstream.stanford.xsede.orgTorch is a scientific computing framework with wide support for machine learning algorithms that puts GPUs first.2018-02-24T15:09:07Z
torch5633c24ebridges.psc.xsede.org2018-02-24T15:02:12Z
totalview8.12.1supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
transdecoder3.0.1bridges.psc.xsede.orgTransDecoder identifies candidate coding regions within transcript sequences.2018-02-24T15:02:12Z
transrate1.0.3bridges.psc.xsede.orgSoftware for de-novo transcriptome assembly quality analysis.2018-02-24T15:02:12Z
trilinos11.12.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
trilinos11.14.3stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2018-01-29T21:56:50Z
trilinos12.0.1stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2018-01-29T21:56:50Z
trilinos12.10.1stampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2018-02-24T15:09:22Z
trilinos12.2.1stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2018-01-29T21:56:50Z
trilinos12.6.1stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2018-01-29T21:56:50Z
trilinos12.6.4stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2018-01-29T21:56:50Z
trim_galore0.4.4stampede2.tacc.xsede.orgConsistent quality and adapter trimming for RRBS or standard FastQ files2018-02-24T15:09:22Z
trimmomatic0.35comet.sdsc.xsede.org2018-02-24T15:01:01Z
trimmomatic0.36bridges.psc.xsede.org2018-02-24T15:02:12Z
trinity2.0.6bridges.psc.xsede.org2018-02-24T15:02:12Z
trinity2.1.1bridges.psc.xsede.org2018-02-24T15:02:12Z
trinity2.1.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
trinity2.2.0bridges.psc.xsede.org2018-02-24T15:02:12Z
trinity2.3.2bridges.psc.xsede.org2018-02-24T15:02:12Z
trinity2.4.0bridges.psc.xsede.org2018-02-24T15:02:12Z
trinityrnaseq2.5.1wrangler.tacc.xsede.orgDe novo RNA-Seq Assembler2018-02-24T14:49:23Z
trinityrnaseqr20131110stampede.tacc.xsede.orgPackage for RNA-Seq de novo Assembly2018-01-29T21:56:51Z
trinityrnaseqr20140717stampede.tacc.xsede.orgPackage for RNA-Seq de novo Assembly2018-01-29T21:56:51Z
trinotate2.0.2bridges.psc.xsede.org2018-02-24T15:02:12Z
trinotate_db2.0bridges.psc.xsede.org2018-02-24T15:02:12Z
trinotate_db2.0_pylon1bridges.psc.xsede.org2018-02-24T15:02:12Z
trnascan-se1.23bridges.psc.xsede.orgScan a sequence file for tRNAs using tRNAscan, EufindtRNA and tRNA covariance models2018-02-24T15:02:12Z
uberftp2.6maverick.tacc.xsede.orgTeraGrid Uberftp utility2018-02-24T15:15:30Z
uberftp2.6supermic.cct-lsu.xsede.orgInteractive GridFTP client2018-02-24T15:22:56Z
uberftp2.8bridges.psc.xsede.orgUberFTP GridFTP client2018-02-24T15:02:12Z
uberftp2.8maverick.tacc.xsede.orgTeraGrid Uberftp utility2018-02-24T15:15:30Z
uberftp2.8stampede.tacc.xsede.orgTeraGrid Uberftp utility2018-01-29T21:56:50Z
uberftp2.8stampede2.tacc.xsede.orgTeraGrid Uberftp utility2018-02-24T15:09:22Z
uberftp2.8wrangler.tacc.xsede.orgTeraGrid Uberftp utility2018-02-24T14:49:23Z
udunits2.2.19maverick.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets.2018-02-24T15:15:30Z
udunits2.2.19stampede.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets.2018-01-29T21:56:50Z
udunits2.2.25stampede2.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets.2018-02-24T15:09:22Z
ufraw0.22bridges.psc.xsede.org2018-02-24T15:02:12Z
umfpack5.7.1stampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
umfpack5.7.1-complexstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
umfpack5.7.1-complexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
umfpack5.7.1-cxxstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
umfpack5.7.1-cxxcomplexstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
umfpack5.7.1-cxxcomplexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
umfpack5.7.1-cxxdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
umfpack5.7.1-debugstampede2.tacc.xsede.orgNumerical library for sparse solvers2018-02-24T15:09:22Z
unceqr2016-07-08bridges.psc.xsede.org2018-02-24T15:02:12Z
unicore6.6.0supermic.cct-lsu.xsede.org2018-02-24T15:22:57Z
use.ownnonecomet.sdsc.xsede.org This module file will add \$HOME/privatemodules to the list of directories that the module command will search for modules. Place your own module files here. This module, when loaded, will create this directory if necessary. Version $rkoversion2018-02-24T15:01:01Z
valgrind3.12.0stampede2.tacc.xsede.orgDynamic memory testing and debugging tools2018-02-24T15:09:22Z
valgrind3.8.1stampede.tacc.xsede.orgDynamic memory testing and debugging tools2018-01-29T21:56:50Z
varscan2.4.2bridges.psc.xsede.org2018-02-24T15:02:12Z
vasp4.6comet.sdsc.xsede.org2018-02-24T15:01:01Z
vasp5.3.5stampede.tacc.xsede.orgVienna Ab-Initio Simulation Package2018-01-29T21:56:50Z
vasp5.4.1stampede.tacc.xsede.orgVienna Ab-Initio Simulation Package2018-01-29T21:56:50Z
vasp5.4.4comet.sdsc.xsede.org2018-02-24T15:01:01Z
vasp5.4.4stampede2.tacc.xsede.orgVienna Ab-Initio Simulation Package2018-02-24T15:09:22Z
vasp6bstampede2.tacc.xsede.orgVienna Ab-Initio Simulation Package2018-02-24T15:09:22Z
vaspvaspbridges.psc.xsede.org2018-02-24T15:02:12Z
vcftools0.1.14comet.sdsc.xsede.org2018-02-24T15:01:01Z
vcftools0.1.15bridges.psc.xsede.orgVCFtools is a program package designed for working with VCF files, such as those generated by the 1000 Genomes Project.2018-02-24T15:02:12Z
velvet1.2.08stampede.tacc.xsede.orgVelvet - Sequence assembler for very short reads2018-01-29T21:56:51Z
velvet1.2.10comet.sdsc.xsede.org2018-02-24T15:01:01Z
velvet1.2.10wrangler.tacc.xsede.orgVelvet - Sequence assembler for very short reads2018-02-24T14:49:23Z
velvet1.2.10-maxk63-bigbridges.psc.xsede.org2018-02-24T15:02:12Z
velvet1.2.10-maxk63-categ14-bigbridges.psc.xsede.org2018-02-24T15:02:12Z
visit2.12.0stampede2.tacc.xsede.orga parallel visualization suite based in part on VTK2018-02-24T15:09:22Z
visit2.12.3bridges.psc.xsede.org2018-02-24T15:02:12Z
visit2.7maverick.tacc.xsede.orga parallel visualization suite based in part on VTK2018-02-24T15:15:30Z
visit2.9maverick.tacc.xsede.orga parallel visualization suite based in part on VTK2018-02-24T15:15:30Z
visit2.9stampede.tacc.xsede.orga parallel visualization suite based in part on VTK2018-01-29T21:56:50Z
visit2.9.1comet.sdsc.xsede.org2018-02-24T15:01:01Z
vmatch2.2.2supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
vmd1.9.2bridges.psc.xsede.org2018-02-24T15:02:12Z
vmd1.9.2stampede.tacc.xsede.org2018-01-29T21:56:51Z
vmd1.9.3comet.sdsc.xsede.org2018-02-24T15:01:01Z
vmd1.9.3stampede2.tacc.xsede.org2018-02-24T15:09:22Z
voro++0.4.5stampede.tacc.xsede.orgVoronoi Tesselation code2018-01-29T21:56:51Z
vtk6.1.0maverick.tacc.xsede.organ open-source system for 3D computer graphics, image processing and visualization2018-02-24T15:15:30Z
vtune13.update14stampede.tacc.xsede.orgIntel VTune Amplifier (C/C++/Fortran for x86_64)2018-01-29T21:56:51Z
vtune17.update4stampede2.tacc.xsede.orgIntel VTune Amplifier2018-02-24T15:09:22Z
vtune18.0.2stampede2.tacc.xsede.orgIntel VTune Amplifier2018-02-24T15:09:22Z
vtune2015.3.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
vtune2016.3.0bridges.psc.xsede.org2018-02-24T15:02:12Z
vtune2017.3.0bridges.psc.xsede.org2018-02-24T15:02:12Z
vtune2017.4.0bridges.psc.xsede.org2018-02-24T15:02:12Z
weaver2017-11-17bridges.psc.xsede.orgAllele-Specific Quantification of Structural Variations in Cancer Genomes2018-02-24T15:02:12Z
weka3.7.12comet.sdsc.xsede.org2018-02-24T15:01:01Z
westpa15acf5d3bridges.psc.xsede.org2018-02-24T15:02:12Z
wgs7.0stampede.tacc.xsede.orgCelera assembler - de novo whole-genome shotgun (WGS) DNA sequence assembler2018-01-29T21:56:51Z
wgs8.2bridges.psc.xsede.org2018-02-24T15:02:12Z
wgs8.3rc2bridges.psc.xsede.org2018-02-24T15:02:12Z
wq264supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
wq272supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
wranglerirods4wrangler.tacc.xsede.orgirods2018-02-24T14:49:23Z
xalt0.6stampede.tacc.xsede.orgCollects system usage data2018-01-29T21:56:51Z
xalt1.7.7stampede2.tacc.xsede.orgCollects system usage data2018-02-24T15:09:22Z
xalt1.8maverick.tacc.xsede.orgCollects system usage data2018-02-24T15:15:30Z
xdinfo1.3-1maverick.tacc.xsede.org2018-02-24T15:15:30Z
xdinfo1.3-1stampede.tacc.xsede.org2018-01-29T21:56:50Z
xdinfo1.3-1stampede2.tacc.xsede.org2018-02-24T15:09:22Z
xdinfo1.3-1supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
xdinfo1.3-1wrangler.tacc.xsede.org2018-02-24T14:49:23Z
xdinfo1.3-2bridges.psc.xsede.orgXSEDE xdinfo client2018-02-24T15:02:12Z
xdresourceid1.0comet.sdsc.xsede.org2018-02-24T15:01:01Z
xdresourceid1.0maverick.tacc.xsede.org2018-02-24T15:15:30Z
xdresourceid1.0stampede.tacc.xsede.org2018-01-29T21:56:50Z
xdresourceid1.0stampede2.tacc.xsede.org2018-02-24T15:09:22Z
xdresourceid1.0supermic.cct-lsu.xsede.org2018-02-24T15:22:57Z
xdresourceid1.0test1.test.xsede.org2018-02-24T11:50:33Z
xdresourceid1.0wrangler.tacc.xsede.org2018-02-24T14:49:23Z
xdresourceid1.0-2bridges.psc.xsede.orgXSEDE Resource ID client2018-02-24T15:02:12Z
xdusage1.1-2supermic.cct-lsu.xsede.org2018-02-24T15:22:57Z
xdusage2.0maverick.tacc.xsede.orgXSede Usage utility2018-02-24T15:15:30Z
xdusage2.0stampede.tacc.xsede.orgXSede Usage utility2018-01-29T21:56:50Z
xdusage2.0stampede2.tacc.xsede.orgXSede Usage utility2018-02-24T15:09:22Z
xdusage2.0wrangler.tacc.xsede.orgXSede Usage utility2018-02-24T14:49:23Z
xdusage2.0-3bridges.psc.xsede.orgadds XSEDE xdusage tool to paths in the login shell environment2018-02-24T15:02:12Z
xdusage2.0-3supermic.cct-lsu.xsede.org2018-02-24T15:22:57Z
xdusage2.0-4bridges.psc.xsede.orgXSEDE xdusage client2018-02-24T15:02:12Z
xdusage2.0.3test1.test.xsede.org2018-02-24T11:50:33Z
xhmm1.0bridges.psc.xsede.orgxhmm uses principal component analysis (PCA) normalization and a hidden Markov model (HMM) to detect and genotype copy number variation (CNV) from normalized read-depth data from targeted sequencing experiments.2018-02-24T15:02:12Z
xsede1.0supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
xsede1.1supermic.cct-lsu.xsede.org2018-02-24T15:22:56Z
zlib1.2.11bridges.psc.xsede.org2018-02-24T15:02:12Z
zlib1.2.8bridges.psc.xsede.org2018-02-24T15:02:12Z
zlib1.2.8stampede.tacc.xsede.orgGeneral purpose compression library: %{ZLIB_VERSION}.2018-01-29T21:56:50Z
zlib1.2.8stampede2.tacc.xsede.orgA Massively Spiffy Yet Delicately Unobtrusive Compression Library2018-02-24T15:09:22Z
zlib1.2.8xstream.stanford.xsede.org2018-02-24T15:09:06Z