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L1-3 SP Operational Components

Services

Interface NameInterface VersionResource IDService TypeURLQuality LevelServing StateCreation Time
org.globus.gram5.0.4-r1supermic.cct-lsu.xsede.orgComputingServicesmic1.hpc.lsu.edu:2119/productionproduction2017-07-21T15:38:43Z
org.globus.gram5.2.3stampede.tacc.xsede.orgComputingServicelogin5.stampede.tacc.utexas.edu:2119/jobmanager-slurmproductionproduction2017-07-21T16:27:08Z
org.globus.gridftp12.1bridges.psc.xsede.orgStorageServicegsiftp://gridftp.bridges.psc.edu:2811/productionproduction2017-07-21T15:42:53Z
org.globus.gridftp12.1xstream.stanford.xsede.orgStorageServicegsiftp://xstream.stanford.xsede.org:2811/productionproduction2017-07-21T16:33:47Z
org.globus.gridftp6.0.1maverick.tacc.xsede.orgStorageServicegsiftp://gridftp.stampede.tacc.xsede.org:2811/productionproduction2017-07-21T16:28:32Z
org.globus.gridftp6.0.1stampede.tacc.xsede.orgStorageServicegsiftp://gridftp.stampede.tacc.xsede.org:2811/productionproduction2017-07-21T16:27:08Z
org.globus.gridftp6.0.1stampede2.tacc.xsede.orgStorageServicegsiftp://gridftp.stampede2.tacc.xsede.org:2811/productionproduction2017-07-21T15:56:28Z
org.globus.gridftp6.0.1supermic.cct-lsu.xsede.orgStorageServicegsiftp://supermic.cct-lsu.xsede.org:2811/productionproduction2017-07-21T15:38:43Z
org.globus.gridftp6.0.1wrangler.tacc.xsede.orgStorageServicegsiftp://gridftp1.wrangler.tacc.utexas.edu:2811/productionproduction2017-07-21T15:46:10Z
org.globus.gridftp6.38comet.sdsc.xsede.orgStorageServicegsiftp://oasis-dm.sdsc.xsede.org:2811productionproduction2017-07-21T16:03:02Z
org.globus.openssh5.9p1-hpn13v11comet.sdsc.xsede.orgLoginServicecomet.sdsc.xsede.org:22productionproduction2017-07-21T16:03:02Z
org.globus.openssh6.2p1mason.iu.xsede.orgLoginServicemason.iu.xsede.orgproductionproduction2017-07-18T17:04:12Z
org.globus.openssh7.1p2maverick.tacc.xsede.orgLoginServicemaverick.tacc.xsede.org:2222productionproduction2017-07-21T16:28:32Z
org.globus.openssh7.1p2stampede.tacc.xsede.orgLoginServicestampede.tacc.xsede.org:2222productionproduction2017-07-21T16:27:08Z
org.globus.openssh7.1p2stampede2.tacc.xsede.orgLoginServicestampede2.tacc.xsede.org:2222productionproduction2017-07-21T15:56:28Z
org.globus.openssh7.1p2wrangler.tacc.xsede.orgLoginServicewrangler.tacc.xsede.org:2222productionproduction2017-07-21T15:46:10Z
org.globus.openssh7.1p2csupermic.cct-lsu.xsede.orgLoginServicesupermic.cct-lsu.xsede.org:2222productionproduction2017-07-21T15:38:43Z
org.globus.openssh7.1p2fgrid1.osg.xsede.orgLoginServicesubmit-1.osg.xsede.orgproductionproduction2017-07-07T22:00:11Z
org.globus.openssh7.3p1cbridges.psc.xsede.orgLoginServicebridges.psc.edu:2222productionproduction2017-07-21T15:42:53Z
org.globus.openssh7.3p1cwrangler.iu.xsede.orgLoginServicewrangler.iu.xsede.org:2222productionproduction2017-07-18T17:10:56Z
org.globus.openssh7.3p1cxstream.stanford.xsede.orgLoginServicexstream.stanford.xsede.org:2222productionproduction2017-07-21T16:33:47Z
org.xsede.mds-stopgap1.2supermic.cct-lsu.xsede.orgInformationServicesupermic.cct-lsu.xsede.orgproductionproduction2017-07-21T15:38:43Z

Software

App NameApp VersionResource IDDescriptionCreation Time
.gnuatlas/3.10.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnuboost/1.55.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnufftw/2.1.5comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnufftw/3.3.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnugsl/1.16comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnugsl/2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnuhdf4/2.11comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnuhdf5/1.8.14comet.sdsc.xsede.orgmust specify one of the following mpi modules: mvapich2_ib openmpi_ib2017-07-21T15:01:01Z
.gnulapack/3.6.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnumvapich2_gdr/2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnumvapich2_gdr/2.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnumvapich2_ib/2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnunetcdf/3.6.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnunetcdf/4.3.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnuopenmpi_ib/1.8.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnup3dfft/2.7.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnuparmetis/4.0.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnupetsc/3.6.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnuscalapack/2.0.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnuslepc/3.6.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnusprng/2.0bcomet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnusundials/2.6.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnusuperlu/4.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.gnutrilinos/11.12.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgifftw/2.1.5comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgifftw/3.3.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgigsl/1.16comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgigsl/2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgihdf4/2.11comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgihdf5/1.8.14comet.sdsc.xsede.orgmust specify one of the following mpi modules: mvapich2_ib openmpi_ib2017-07-21T15:01:01Z
.pgilapack/3.6.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgimvapich2_gdr/2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgimvapich2_gdr/2.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgimvapich2_ib/2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pginetcdf/3.6.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pginetcdf/4.3.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgiopenmpi_ib/1.8.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgip3dfft/2.7.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgiparmetis/4.0.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgipetsc/3.6.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgiscalapack/2.0.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgislepc/3.6.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgisprng/2.0bcomet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgisundials/2.6.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
.pgisuperlu/4.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
AIPS31DEC16bridges.psc.xsede.org2017-07-21T15:04:49Z
ATLAS3.10.2-LAPACK-3.5.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
Abinit7.10.5bridges.psc.xsede.org2017-07-21T15:04:49Z
Abinit8.0.8bbridges.psc.xsede.org2017-07-21T15:04:49Z
Amber14xstream.stanford.xsede.org2017-07-21T14:56:54Z
Autoconf2.69xstream.stanford.xsede.org2017-07-21T14:56:54Z
Automake1.15xstream.stanford.xsede.org2017-07-21T14:56:54Z
Autotools20150215xstream.stanford.xsede.org2017-07-21T14:56:54Z
BerkeleyGW1.2.0bridges.psc.xsede.org2017-07-21T15:04:50Z
Bison3.0.4xstream.stanford.xsede.org2017-07-21T14:56:54Z
Boost1.59.0-Python-2.7.10xstream.stanford.xsede.org2017-07-21T14:56:54Z
Boost1.60.0-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
Boost1.61.0-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
CFITSIO3380bridges.psc.xsede.org2017-07-21T15:04:50Z
CMake2.8.11xstream.stanford.xsede.org2017-07-21T14:56:54Z
CMake2.8.12xstream.stanford.xsede.org2017-07-21T14:56:54Z
CMake3.2.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
CMake3.3.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
CP2K3.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
CP2K4.1bridges.psc.xsede.org2017-07-21T15:04:50Z
CUDA6.5.14xstream.stanford.xsede.org2017-07-21T14:56:54Z
CUDA7.0.28xstream.stanford.xsede.org2017-07-21T14:56:54Z
CUDA7.5.18xstream.stanford.xsede.org2017-07-21T14:56:54Z
CUDA8.0.44xstream.stanford.xsede.org2017-07-21T14:56:54Z
CUDA8.0.61xstream.stanford.xsede.org2017-07-21T14:56:54Z
CUDAdefaultxstream.stanford.xsede.org2017-07-21T14:56:54Z
Cython0.24.1-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
Cython0.26-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
Doxygen1.8.9.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
EasyBuild1.11.1supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
EasyBuild1.13.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
EasyBuild2.3.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
EasyBuild2.6.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
Elemental0.85-HybridDebugstampede.tacc.xsede.orgLibrary for distributed dense linear algebra2017-07-21T14:29:15Z
Elemental0.85-HybridReleasestampede.tacc.xsede.orgLibrary for distributed dense linear algebra2017-07-21T14:29:15Z
Elemental0.85-PureDebugstampede.tacc.xsede.orgLibrary for distributed dense linear algebra2017-07-21T14:29:15Z
Elemental0.85-PureReleasestampede.tacc.xsede.orgLibrary for distributed dense linear algebra2017-07-21T14:29:15Z
Emacs24.4xstream.stanford.xsede.org2017-07-21T14:56:54Z
FFTW3.3.4xstream.stanford.xsede.org2017-07-21T14:56:54Z
FLAC1.3.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
FLTK1.3.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
GCC4.9.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
GCC4.9.2-binutils-2.25xstream.stanford.xsede.org2017-07-21T14:56:54Z
GDAL2.0.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
GLib2.44.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
GMP5.0.5xstream.stanford.xsede.org2017-07-21T14:56:54Z
GMP6.0.0axstream.stanford.xsede.org2017-07-21T14:56:54Z
GNU4.9.2-2.25xstream.stanford.xsede.org2017-07-21T14:56:54Z
GROMACS5.1-hybridxstream.stanford.xsede.org2017-07-21T14:56:54Z
GROMACS5.1-hybrid.pl1xstream.stanford.xsede.org2017-07-21T14:56:54Z
GSL2.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
GenomeAnalysisTK3.5comet.sdsc.xsede.org2017-07-21T15:01:01Z
GenomeAnalysisTK3.6comet.sdsc.xsede.org2017-07-21T15:01:01Z
Guile1.8.8xstream.stanford.xsede.org2017-07-21T14:56:54Z
HDF51.8.15-patch1xstream.stanford.xsede.org2017-07-21T14:56:54Z
HDF51.8.15-patch1-no-mpixstream.stanford.xsede.org2017-07-21T14:56:54Z
ICU4C57.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
INTEL14.0.2supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
INTEL15.0.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
INTEL-140-MPICH3.1.1supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
INTEL-140-MVAPICH22.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
IPython3.2.1-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
ImageMagick6.9.2-8xstream.stanford.xsede.org2017-07-21T14:56:54Z
JUnit4.11-Java-1.7.0_80xstream.stanford.xsede.org2017-07-21T14:56:54Z
JUnit4.11-Java-1.8.0_74xstream.stanford.xsede.org2017-07-21T14:56:54Z
JasPer1.900.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
Java1.7.0_80xstream.stanford.xsede.org2017-07-21T14:56:54Z
Java1.8.0_121xstream.stanford.xsede.org2017-07-21T14:56:54Z
Java1.8.0_74xstream.stanford.xsede.org2017-07-21T14:56:54Z
LAME3.99.5xstream.stanford.xsede.org2017-07-21T14:56:54Z
LAMMPS17Nov2016-CUDA-8.0.44-K80xstream.stanford.xsede.org2017-07-21T14:56:54Z
LAMMPSr14624bridges.psc.xsede.org2017-07-21T15:04:52Z
LAMMPSr15297bridges.psc.xsede.org2017-07-21T15:04:52Z
LAPACK3.5.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
LLVM3.7.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
LMDB0.9.18xstream.stanford.xsede.org2017-07-21T14:56:54Z
LevelDB1.18xstream.stanford.xsede.org2017-07-21T14:56:54Z
LibTIFF4.0.6xstream.stanford.xsede.org2017-07-21T14:56:54Z
Libint1.1.4xstream.stanford.xsede.org2017-07-21T14:56:54Z
Libint1.1.5xstream.stanford.xsede.org2017-07-21T14:56:54Z
M41.4.17xstream.stanford.xsede.org2017-07-21T14:56:54Z
MAST2.0.0stampede.tacc.xsede.orgMAST - MAterials Simulation Toolkit2017-07-21T14:29:15Z
MAST2.0.0stampede2.tacc.xsede.orgMAST - MAterials Simulation Toolkit, Community Supported Software2017-07-21T14:56:49Z
MATIO1.5.8xstream.stanford.xsede.org2017-07-21T14:56:54Z
MPICH3.0.4xstream.stanford.xsede.org2017-07-21T14:56:54Z
MPICH21.5xstream.stanford.xsede.org2017-07-21T14:56:54Z
Magma2.0.1bridges.psc.xsede.org2017-07-21T15:04:52Z
Maven3.3.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
Mercurial3.2.4-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
Mesa11.0.6-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
Mesa7.11.2-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
NAMD2.11-smp-ibverbs-cudaxstream.stanford.xsede.org2017-07-21T14:56:54Z
NASM2.11.08xstream.stanford.xsede.org2017-07-21T14:56:54Z
NVcaffe0.15.13-CUDA-7.5.18-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
OpenBLAS0.2.14-LAPACK-3.5.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
OpenCV2.4.11xstream.stanford.xsede.org2017-07-21T14:56:54Z
OpenCV3.1.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
OpenMM6.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
OpenMM6.3.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
OpenMPI1.8.5xstream.stanford.xsede.org2017-07-21T14:56:54Z
OpenMPI1.8.8xstream.stanford.xsede.org2017-07-21T14:56:54Z
OpenPGM5.2.122xstream.stanford.xsede.org2017-07-21T14:56:54Z
OptiX3.8.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
OptiX3.9.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
PCRE8.36xstream.stanford.xsede.org2017-07-21T14:56:54Z
PCRE8.37xstream.stanford.xsede.org2017-07-21T14:56:54Z
PLUMED2.2.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
PROJ4.9.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
Perl5.20.1-barexstream.stanford.xsede.org2017-07-21T14:56:54Z
Pillow3.2.0-Python-2.7.9-freetype-2.6xstream.stanford.xsede.org2017-07-21T14:56:54Z
Platypus0.5.2stampede.tacc.xsede.org2017-07-21T14:29:15Z
PostgreSQL9.3.12-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
PostgreSQL9.5.2-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
PrgEnv-cray1.0.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
PyZMQ14.7.0-Python-2.7.9-zmq3xstream.stanford.xsede.org2017-07-21T14:56:54Z
Pygments2.0.2-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
Python2.7.10xstream.stanford.xsede.org2017-07-21T14:56:54Z
Python2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
Python3.6.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
Pythondefaultxstream.stanford.xsede.org2017-07-21T14:56:54Z
Qhull2015.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
Qt4.8.7-GLib-2.44.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
Qt55.4.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
Qt55.5.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
Qt55.6.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
QuantumEspresso5.3.0bridges.psc.xsede.org2017-07-21T15:04:53Z
QuantumEspresso5.4.0bridges.psc.xsede.org2017-07-21T15:04:53Z
QuantumEspresso6.0.0bridges.psc.xsede.org2017-07-21T15:04:53Z
R2.15.1stampede.tacc.xsede.orgstatistics package2017-07-21T14:29:16Z
R3.2.3-mklbridges.psc.xsede.org2017-07-21T15:04:53Z
R3.2.4-libX11-1.6.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
R3.3.1-mklbridges.psc.xsede.org2017-07-21T15:04:53Z
R3.3.3-mklbridges.psc.xsede.org2017-07-21T15:04:53Z
R3.4.0comet.sdsc.xsede.orgNo supported MPI flavor found No supported network found2017-07-21T15:01:01Z
RELION2.0.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
RStudio0.99.893xstream.stanford.xsede.org2017-07-21T14:56:54Z
Rstats3.0.3maverick.tacc.xsede.orgstatistics package2017-07-21T14:28:46Z
Rstats3.2.1stampede.tacc.xsede.orgstatistics package2017-07-21T14:29:15Z
Rstats3.2.1wrangler.tacc.xsede.org2017-07-21T14:46:27Z
Rstats3.4.0stampede2.tacc.xsede.org2017-07-21T14:56:49Z
RstatsPackages3.2.1wrangler.tacc.xsede.org2017-07-21T14:46:27Z
RstatsPackages3.4.0stampede2.tacc.xsede.org2017-07-21T14:56:49Z
Rstudio0.98.501maverick.tacc.xsede.orgPowerful IDE for R2017-07-21T14:28:46Z
Rstudio0.98.501stampede.tacc.xsede.orgPowerful IDE for R2017-07-21T14:29:16Z
Rstudio0.99.473wrangler.tacc.xsede.orgPowerful IDE for R2017-07-21T14:46:27Z
Rstudio0.99.903stampede.tacc.xsede.orgPowerful IDE for R2017-07-21T14:29:16Z
Rstudio0.99.903stampede2.tacc.xsede.orgPowerful IDE for R2017-07-21T14:56:49Z
Rstudio0.99.903wrangler.tacc.xsede.orgPowerful IDE for R2017-07-21T14:46:27Z
SOAPsnp1.03comet.sdsc.xsede.org2017-07-21T15:01:01Z
SQLite3.8.10.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
SQLite3.8.8.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
SWIG3.0.12-Python-3.6.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
SWIG3.0.7-Python-2.7.10xstream.stanford.xsede.org2017-07-21T14:56:54Z
SWIG3.0.7-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
SWIGdefaultxstream.stanford.xsede.org2017-07-21T14:56:54Z
ScaLAPACK2.0.2-OpenBLAS-0.2.14-LAPACK-3.5.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
Siesta4.0b-485bridges.psc.xsede.org2017-07-21T15:04:54Z
Singular4.1.0bridges.psc.xsede.org2017-07-21T15:04:54Z
SoX14.4.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
Szip2.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
Tcl8.6.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
Tcl8.6.4xstream.stanford.xsede.org2017-07-21T14:56:54Z
Theano0.7.0-Python-2.7.10xstream.stanford.xsede.org2017-07-21T14:56:54Z
Theano0.8.2-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
Theano0.8.2-Python-2.7.9-noMPIxstream.stanford.xsede.org2017-07-21T14:56:54Z
Theano0.9.0-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
Theano0.9.0-Python-2.7.9-noMPIxstream.stanford.xsede.org2017-07-21T14:56:54Z
Tk8.6.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
Tk8.6.3-no-X11xstream.stanford.xsede.org2017-07-21T14:56:54Z
Tk8.6.4-no-X11xstream.stanford.xsede.org2017-07-21T14:56:54Z
VMD1.9.2-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
ViennaRNA2.2.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
XKeyboardConfig2.16-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
XML-Parser2.41-Perl-5.20.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
Yasm1.3.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
ZeroMQ3.2.5xstream.stanford.xsede.org2017-07-21T14:56:54Z
abaqus2016bridges.psc.xsede.org2017-07-21T15:04:49Z
abaqus6.11-2comet.sdsc.xsede.org2017-07-21T15:01:01Z
abaqus6.14-1comet.sdsc.xsede.org2017-07-21T15:01:01Z
abinit7.10.5comet.sdsc.xsede.org2017-07-21T15:01:01Z
abyss1.9.0bridges.psc.xsede.orgABySS is a de novo sequence assembler intended for short paired-end reads and large genomes.2017-07-21T15:04:49Z
abyss2.0.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
allinea6.0.6xstream.stanford.xsede.orgAllinea Forge is the development tool suite C++ and Fortran high performance codes on Linux.2017-07-21T14:56:54Z
allpaths-lg52488bridges.psc.xsede.orgA short read assembler.2017-07-21T15:04:49Z
allpathslg48777stampede.tacc.xsede.orgALLPATHS-LG - Broad Institute assembler for complex eukaryote genomes2017-07-21T14:29:15Z
allpathslg52488stampede.tacc.xsede.orgALLPATHS-LG - Broad Institute assembler for complex eukaryote genomes2017-07-21T14:29:15Z
amask1.0stampede2.tacc.xsede.org2017-07-21T14:56:49Z
amber16comet.sdsc.xsede.org2017-07-21T15:01:01Z
ambertools16xstream.stanford.xsede.orgThe Amber Molecular Dynamics Package (intel/2015.5.223 Python/2.7.10)2017-07-21T14:56:54Z
amira6.0.1maverick.tacc.xsede.orga visualization platform for biomedical data2017-07-21T14:28:46Z
amos3.1.0stampede.tacc.xsede.orgAMOS - A Modular, Open-Source whole genome assembler2017-07-21T14:29:16Z
anaconda4.0bridges.psc.xsede.org2017-07-21T15:04:49Z
anaconda4.2.0-3.5.2bridges.psc.xsede.org2017-07-21T15:04:49Z
annovar2016.02.01bridges.psc.xsede.org2017-07-21T15:04:49Z
ansys15.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
ansys16.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
ansys17.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
ansys17.1bridges.psc.xsede.orgANSYS is a general purpose finite element modeling package. It includes ANSYS Multiphysics and Fluent.2017-07-21T15:04:49Z
ant1.9.3-Java-1.7.0_80xstream.stanford.xsede.org2017-07-21T14:56:54Z
ant1.9.4supermic.cct-lsu.xsede.orgApache Ant is a Java library and command-line tool whose mission is to drive processes described in build files as targets and extension points dependent upon each other. The main known usage of Ant is the build of Java applications.2017-07-21T14:40:38Z
ant1.9.6-Java-1.8.0_74xstream.stanford.xsede.org2017-07-21T14:56:54Z
anvio2.0.2bridges.psc.xsede.orgAnvi'o is an analysis and visualization platform for 'omics data.2017-07-21T15:04:49Z
anvio2.2.2bridges.psc.xsede.orgAnvi'o is an analysis and visualization platform for 'omics data.2017-07-21T15:04:49Z
anvio2.3.1bridges.psc.xsede.orgAnvi'o is an analysis and visualization platform for 'omics data.2017-07-21T15:04:49Z
apache-maven3.2.2wrangler.tacc.xsede.org2017-07-21T14:46:27Z
apbs1.4.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
aragorn1.2.38bridges.psc.xsede.orgARAGORN detects tRNA, mtRNA, and tmRNA genes.2017-07-21T15:04:49Z
arpack3.1.4stampede.tacc.xsede.orgeigenvalue computations based on restarted Arnoldi method2017-07-21T14:29:15Z
aspera3.6.2bridges.psc.xsede.org2017-07-21T15:04:49Z
aspera-connect3.6.1.110647stampede.tacc.xsede.orgAspera Connect client2017-07-21T14:29:15Z
aspera-connect3.6.1.110647wrangler.tacc.xsede.orgAspera Connect client2017-07-21T14:46:27Z
atlas3.10.2bridges.psc.xsede.org2017-07-21T15:04:49Z
atlas3.10.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
augustus3.2.2bridges.psc.xsede.org2017-07-21T15:04:49Z
autodock4.2.5.1stampede.tacc.xsede.orgautodock - a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure.2017-07-21T14:29:15Z
autodock4.2.6bridges.psc.xsede.org2017-07-21T15:04:49Z
autodock_vina1.1.2stampede.tacc.xsede.orgOpen-source program for drug discovery, molecular docking and virtual screening, offering multi-core capability, high performance and enhanced accuracy and ease of use.2017-07-21T14:29:15Z
autotools1.0maverick.tacc.xsede.orgDeveloper utilities2017-07-21T14:28:46Z
autotools1.0stampede.tacc.xsede.orgDeveloper utilities2017-07-21T14:29:15Z
autotools1.1stampede.tacc.xsede.orgDeveloper utilities2017-07-21T14:29:15Z
autotools1.1stampede2.tacc.xsede.org2017-07-21T14:56:49Z
autotools1.1wrangler.tacc.xsede.orgDeveloper utilities2017-07-21T14:46:27Z
bamtools2.4.0bridges.psc.xsede.org2017-07-21T15:04:49Z
bamtools2.4.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
barrnap0.6bridges.psc.xsede.orgBarrnap predicts the location of ribosomal RNA genes in genomes.2017-07-21T15:04:49Z
basemap1.1.0stampede2.tacc.xsede.orgPlot 2D data on maps in Python2017-07-21T14:56:49Z
bazel0.2.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
bazel0.3.1bridges.psc.xsede.org2017-07-21T15:04:49Z
bazel0.3.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
bazel0.3.2bridges.psc.xsede.org2017-07-21T15:04:49Z
bazel0.4.1bridges.psc.xsede.org2017-07-21T15:04:49Z
bazel0.4.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
bazel0.4.5bridges.psc.xsede.org2017-07-21T15:04:49Z
bazel0.4.5xstream.stanford.xsede.org2017-07-21T14:56:54Z
bazel0.5.1bridges.psc.xsede.org2017-07-21T15:04:49Z
bbcp14.09.02.00.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
bbcp15.02.03supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
bbftp3.2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
bcftools0.1.19bridges.psc.xsede.orgUtilities for variant calling and manipulating VCFs and BCFs.2017-07-21T15:04:49Z
bcftools1.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
bcftools1.3.1bridges.psc.xsede.orgUtilities for variant calling and manipulating VCFs and BCFs.2017-07-21T15:04:49Z
beagle2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
beast1.7.5stampede.tacc.xsede.orgTool for Bayesian MCMC analysis of molecular sequences2017-07-21T14:29:15Z
beast1.7.5supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
beast1.8.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
beast1.8.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
beast1.8.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
beast22.1.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
bedops2.4.19bridges.psc.xsede.org2017-07-21T15:04:50Z
bedtools2.19.0stampede.tacc.xsede.orgbedtools: a flexible suite of utilities for comparing genomic features2017-07-21T14:29:15Z
bedtools2.22.1stampede.tacc.xsede.orgbedtools: a flexible suite of utilities for comparing genomic features2017-07-21T14:29:15Z
bedtools2.25.0bridges.psc.xsede.org2017-07-21T15:04:50Z
bedtools2.25.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
bedtools2.25.0stampede.tacc.xsede.orgbedtools: a flexible suite of utilities for comparing genomic features2017-07-21T14:29:15Z
bedtools2.25.0wrangler.tacc.xsede.orgbedtools: a flexible suite of utilities for comparing genomic features2017-07-21T14:46:27Z
bfast0.7.0astampede.tacc.xsede.orgBFAST: Blat-like Fast Accurate Search Tool2017-07-21T14:29:15Z
big-data-r3.2.1wrangler.tacc.xsede.orgbig data R packages2017-07-21T14:46:27Z
binutils2.25xstream.stanford.xsede.org2017-07-21T14:56:54Z
bioperl1.6.901stampede.tacc.xsede.orgBioPerl2017-07-21T14:29:15Z
biopython1.66comet.sdsc.xsede.org2017-07-21T15:01:01Z
biotools4comet.sdsc.xsede.org2017-07-21T15:01:01Z
bismark0.10.1stampede.tacc.xsede.orgbismark - A tool to map bisulfite converted sequence reads and determine cytosine2017-07-21T14:29:15Z
bismark0.14.5stampede.tacc.xsede.orgbismark - A tool to map bisulfite converted sequence reads and determine cytosine2017-07-21T14:29:15Z
bismark0.15.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
blasr1.3.1bridges.psc.xsede.org2017-07-21T15:04:50Z
blast2.2.22supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
blast2.2.28stampede.tacc.xsede.orgNCBI BLAST+ sequence alignment package. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.2017-07-21T14:29:16Z
blast2.2.29stampede.tacc.xsede.orgNCBI BLAST+ sequence alignment package. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.2017-07-21T14:29:16Z
blast2.2.31bridges.psc.xsede.orgBLAST is a search tool that finds regions of local similarity between nucleotide or protein sequences2017-07-21T15:04:50Z
blast2.3.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
blat35comet.sdsc.xsede.org2017-07-21T15:01:01Z
blat35stampede.tacc.xsede.orgBLAST like alignment tool2017-07-21T14:29:15Z
blatv35bridges.psc.xsede.org2017-07-21T15:04:50Z
blis0.1.8stampede.tacc.xsede.orgBLAS-like Library Instantiation Software2017-07-21T14:29:15Z
boost1.50.0bridges.psc.xsede.org2017-07-21T15:04:50Z
boost1.51.0maverick.tacc.xsede.orgBoost provides free peer-reviewed portable C++ source libraries.2017-07-21T14:28:46Z
boost1.55.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
boost1.55.0stampede.tacc.xsede.orgBoost provides free peer-reviewed portable C++ source libraries (Serial Version).2017-07-21T14:29:15Z
boost1.55.0wrangler.tacc.xsede.orgBoost provides free peer-reviewed portable C++ source libraries (Serial Version).2017-07-21T14:46:27Z
boost1.60.0bridges.psc.xsede.org2017-07-21T15:04:50Z
boost1.60.0_gnu_openmpibridges.psc.xsede.org2017-07-21T15:04:50Z
boost1.60.0_py2.7.11bridges.psc.xsede.org2017-07-21T15:04:50Z
boost1.61.0stampede.tacc.xsede.orgBoost provides free peer-reviewed portable C++ source libraries (Serial Version).2017-07-21T14:29:15Z
boost1.61.0_py2.7.11bridges.psc.xsede.org2017-07-21T15:04:50Z
boost1.63.0_py2.7.11bridges.psc.xsede.org2017-07-21T15:04:50Z
boost1.64stampede2.tacc.xsede.orgBoost provides free peer-reviewed portable C++ source libraries.2017-07-21T14:56:49Z
boost-mpi1.55.0stampede.tacc.xsede.orgBoost provides free peer-reviewed portable C++ source libraries (Parallel Version).2017-07-21T14:29:15Z
bowtie1.0.0stampede.tacc.xsede.orgUltrafast, memory-efficient short read aligner2017-07-21T14:29:15Z
bowtie1.1.1bridges.psc.xsede.orgA sequence aligner for short reads.2017-07-21T15:04:50Z
bowtie1.1.1stampede.tacc.xsede.orgUltrafast, memory-efficient short read aligner2017-07-21T14:29:15Z
bowtie1.1.2bridges.psc.xsede.orgA sequence aligner for short reads.2017-07-21T15:04:50Z
bowtie1.1.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
bowtie2.1.0stampede.tacc.xsede.orgUltrafast, memory-efficient short read aligner2017-07-21T14:29:15Z
bowtie2.2.0stampede.tacc.xsede.orgUltrafast, memory-efficient short read aligner2017-07-21T14:29:15Z
bowtie2.2.5stampede.tacc.xsede.orgUltrafast, memory-efficient short read aligner2017-07-21T14:29:15Z
bowtie22.2.7bridges.psc.xsede.orgA tool for aligning sequence reads to long reference sequences.2017-07-21T15:04:50Z
bowtie22.2.7comet.sdsc.xsede.org2017-07-21T15:01:01Z
bsmap2.87.0p1stampede.tacc.xsede.orgBSMAP - short reads mapping software for bisulfite sequencing reads2017-07-21T14:29:15Z
bsmap2.91stampede.tacc.xsede.orgBSMAP - short reads mapping software for bisulfite sequencing reads2017-07-21T14:29:15Z
bsmap2.91wrangler.tacc.xsede.orgBSMAP - short reads mapping software for bisulfite sequencing reads2017-07-21T14:46:27Z
busco1.22bridges.psc.xsede.org2017-07-21T15:04:50Z
bwa0.7.12stampede.tacc.xsede.orgBurrows-Wheeler Alignment Tool2017-07-21T14:29:15Z
bwa0.7.13bridges.psc.xsede.org2017-07-21T15:04:50Z
bwa0.7.13comet.sdsc.xsede.org2017-07-21T15:01:01Z
bwa0.7.7stampede.tacc.xsede.orgbwa - Burrows-Wheeler Alignment Tool2017-07-21T14:29:15Z
bx-python0.7.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
byacc20150711xstream.stanford.xsede.org2017-07-21T14:56:54Z
bzip21.0.6xstream.stanford.xsede.org2017-07-21T14:56:54Z
cURL7.40.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
cURL7.45.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
caffe1.0.0stampede2.tacc.xsede.org2017-07-21T14:56:49Z
caffegit_2c34393fbridges.psc.xsede.org2017-07-21T15:04:50Z
caffegit_be163be0bridges.psc.xsede.org2017-07-21T15:04:50Z
caffegit_erictzeng_5ca549ce2bridges.psc.xsede.org2017-07-21T15:04:50Z
caffegit_master_HEADbridges.psc.xsede.org2017-07-21T15:04:50Z
caffe20.7.0bridges.psc.xsede.org2017-07-21T15:04:50Z
caffe2git_master_HEADbridges.psc.xsede.org2017-07-21T15:04:50Z
cairo1.14.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
cairo1.14.6xstream.stanford.xsede.org2017-07-21T14:56:54Z
canu1.3bridges.psc.xsede.org2017-07-21T15:04:50Z
canu1.5bridges.psc.xsede.org2017-07-21T15:04:50Z
cce8.3.10xstream.stanford.xsede.org2017-07-21T14:56:54Z
cctools5.4.19xstream.stanford.xsede.orgThe Cooperative Computing Tools (cctools) contains Parrot, Chirp, Makeflow, Work Queue, SAND, and other software.2017-07-21T14:56:54Z
cd-hit2016.06.21bridges.psc.xsede.org2017-07-21T15:04:50Z
cd-hit4.6.4stampede.tacc.xsede.orgClustering DNA/protein sequence database at high identity with tolerance.2017-07-21T14:29:15Z
cd-hit4.6.4wrangler.tacc.xsede.orgClustering DNA/protein sequence database at high identity with tolerance.2017-07-21T14:46:27Z
cdbfasta2013bridges.psc.xsede.org2017-07-21T15:04:50Z
celera8.3rc2comet.sdsc.xsede.org2017-07-21T15:01:01Z
centrifuge1.0.3-betabridges.psc.xsede.orgClassifier for metagenomic sequences2017-07-21T15:04:50Z
cfourv1bridges.psc.xsede.org2017-07-21T15:04:50Z
chainer1.24.0bridges.psc.xsede.org2017-07-21T15:04:50Z
charmmMPIbridges.psc.xsede.org2017-07-21T15:04:50Z
checkm1.0.7bridges.psc.xsede.orgA set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes.2017-07-21T15:04:50Z
cilk5.4.6comet.sdsc.xsede.org2017-07-21T15:01:01Z
cmake2.8.12.2maverick.tacc.xsede.orgtool for generation of files from source2017-07-21T14:28:46Z
cmake2.8.9stampede.tacc.xsede.orgtool for generation of files from source2017-07-21T14:29:15Z
cmake3.1.0stampede.tacc.xsede.orgtool for generation of files from source2017-07-21T14:29:15Z
cmake3.5.2bridges.psc.xsede.org2017-07-21T15:04:50Z
cmake3.6.0wrangler.tacc.xsede.orgtool for generation of files from source2017-07-21T14:46:27Z
cmake3.7.1maverick.tacc.xsede.orgtool for generation of files from source2017-07-21T14:28:46Z
cmake3.7.1stampede.tacc.xsede.orgtool for generation of files from source2017-07-21T14:29:15Z
cmake3.7.1stampede2.tacc.xsede.orgtool for generation of files from source2017-07-21T14:56:49Z
cmake3.7.1wrangler.tacc.xsede.orgtool for generation of files from source2017-07-21T14:46:27Z
cmake3.7.2bridges.psc.xsede.org2017-07-21T15:04:50Z
cmake3.8.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
cmake3.8.2stampede2.tacc.xsede.orgtool for generation of files from source2017-07-21T14:56:49Z
condor8.0.4stampede.tacc.xsede.orgCondor for ligo.2017-07-21T14:29:15Z
cp2k2.5.1stampede.tacc.xsede.orgOpen source Ab Initio Molecular Dynamics software2017-07-21T14:29:15Z
cp2k3.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
cpmd3.17.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
cray-libsci13.0.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
cray-libsci_acc3.1.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
craype2.3.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
craypkg-gen1.1.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
cuDNN3.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
cuDNN4.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
cuDNN5.0-CUDA-7.5.18xstream.stanford.xsede.org2017-07-21T14:56:54Z
cuDNN5.0-rcxstream.stanford.xsede.org2017-07-21T14:56:54Z
cuDNN5.1-CUDA-7.5.18xstream.stanford.xsede.org2017-07-21T14:56:54Z
cuDNN5.1-CUDA-8.0.44xstream.stanford.xsede.org2017-07-21T14:56:54Z
cuDNNdefaultxstream.stanford.xsede.org2017-07-21T14:56:54Z
cube4.1.6stampede.tacc.xsede.orgperformance evaluation GUI for Scalasca profiler2017-07-21T14:29:15Z
cuda6.0stampede.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2017-07-21T14:29:15Z
cuda6.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
cuda6.5comet.sdsc.xsede.org2017-07-21T15:01:01Z
cuda6.5maverick.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2017-07-21T14:28:46Z
cuda6.5stampede.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2017-07-21T14:29:15Z
cuda6.5supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
cuda7.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
cuda7.0maverick.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2017-07-21T14:28:46Z
cuda7.0stampede.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2017-07-21T14:29:15Z
cuda7.5bridges.psc.xsede.org2017-07-21T15:04:50Z
cuda7.5maverick.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2017-07-21T14:28:46Z
cuda7.5stampede.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2017-07-21T14:29:15Z
cuda7.5supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
cuda8.0bridges.psc.xsede.org2017-07-21T15:04:50Z
cuda8.0maverick.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2017-07-21T14:28:46Z
cuda8.0stampede.tacc.xsede.orgNVIDIA CUDA Toolkit for Linux2017-07-21T14:29:15Z
cuda8.0RCbridges.psc.xsede.org2017-07-21T15:04:50Z
cudatoolkit6.5.14xstream.stanford.xsede.org2017-07-21T14:56:54Z
cudnn4.0maverick.tacc.xsede.org2017-07-21T14:28:46Z
cufflinks2.1.1stampede.tacc.xsede.orgcufflinks - Transcript assembly, differential expression, and differential regulation for RNA-Seq2017-07-21T14:29:15Z
cufflinks2.1.1supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
cufflinks2.2.1bridges.psc.xsede.org2017-07-21T15:04:50Z
cufflinks2.2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
cufflinks2.2.1stampede.tacc.xsede.orgcufflinks - Transcript assembly, differential expression, and differential regulation for RNA-Seq2017-07-21T14:29:15Z
cutadapt1.5bridges.psc.xsede.orgcutadapt: Reads a FASTA or FASTQ file, finds and removes adapters, and writes the changed sequence to standard output.2017-07-21T15:04:50Z
cvmfs_preload20160902xstream.stanford.xsede.org2017-07-21T14:56:54Z
cxx114.9.1stampede.tacc.xsede.org2017-07-21T14:29:15Z
cxx114.9.1wrangler.tacc.xsede.org2017-07-21T14:46:27Z
dakota6.4.0stampede.tacc.xsede.orgDakota toolkit provides a flexible, extensible interface between analysis codes and iterative systems analysis methods2017-07-21T14:29:15Z
dammit0.3bridges.psc.xsede.orgdammit is a simple de novo transcriptome annotator.2017-07-21T15:04:50Z
ddt4.2.1supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
ddt5.0.1maverick.tacc.xsede.orgParallel, graphical, symbolic debugger2017-07-21T14:28:46Z
ddt6.0.2bridges.psc.xsede.org2017-07-21T15:04:50Z
ddt6.0.3stampede.tacc.xsede.orgParallel, graphical, symbolic debugger2017-07-21T14:29:16Z
ddt6.0.6comet.sdsc.xsede.org2017-07-21T15:01:01Z
ddt7.0bridges.psc.xsede.org2017-07-21T15:04:50Z
ddt7.0.3stampede2.tacc.xsede.orgParallel, graphical, symbolic debugger2017-07-21T14:56:49Z
ddt_mic5.1stampede.tacc.xsede.orgParallel, graphical, symbolic debugger2017-07-21T14:29:15Z
dealii8.2.1stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2017-07-21T14:29:15Z
dealii8.4.1stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2017-07-21T14:29:15Z
dealiigit20170615stampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
decryption2.3.4.2stampede.tacc.xsede.orgDecryption tool is a subset of SRA Toolkit for decrypting the encrypted non-SRA data2017-07-21T14:29:15Z
deeptools2.3.5bridges.psc.xsede.orgdeepTools is a suite of python tools developed for analysis of high-througput sequencing data2017-07-21T15:04:50Z
dendropy4.0.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
desmond2016.1bridges.psc.xsede.org2017-07-21T15:04:50Z
detonate1.10bridges.psc.xsede.org2017-07-21T15:04:50Z
diamond0.7.11bridges.psc.xsede.org2017-07-21T15:04:51Z
diamond0.7.12comet.sdsc.xsede.org2017-07-21T15:01:01Z
diamond0.8.31bridges.psc.xsede.orgDiamond; A fast blastx/blastp replacement for metagenomics.2017-07-21T15:04:51Z
discovar52488bridges.psc.xsede.org2017-07-21T15:04:51Z
discovardenovo52488bridges.psc.xsede.org2017-07-21T15:04:51Z
dizzy1.11.4stampede.tacc.xsede.orgdizzy -chemical kinetics stochastic simulation software package written in Java.2017-07-21T14:29:15Z
dock6.7stampede.tacc.xsede.orgDOCK is a structure-based docking program used to predict the binding mode of small molecule ligands to target receptors, such as proteins.2017-07-21T14:29:15Z
dotnonecomet.sdsc.xsede.org Adds `.' to your PATH environment variable This makes it easy to add the current working directory to your PATH environment variable. This allows you to run executables in your current working directory without prepending ./ to the excutable name Version $dotversion2017-07-21T15:01:01Z
drive-data6.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
ectools2014-12-01bridges.psc.xsede.org2017-07-21T15:04:51Z
edena3.131028comet.sdsc.xsede.org2017-07-21T15:01:01Z
edenaV3.130110stampede.tacc.xsede.orgde novo short reads assembler2017-07-21T14:29:16Z
eigen3.2.7comet.sdsc.xsede.org2017-07-21T15:01:01Z
eigen3.2.8bridges.psc.xsede.org2017-07-21T15:04:51Z
elemental0.87-Debugstampede2.tacc.xsede.orgLibrary for distributed dense linear algebra2017-07-21T14:56:49Z
elemental0.87-Releasestampede2.tacc.xsede.orgLibrary for distributed dense linear algebra2017-07-21T14:56:49Z
elph1.0.1bridges.psc.xsede.orgELPH is a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences.2017-07-21T15:04:51Z
eman1.9stampede.tacc.xsede.orgeman - Software for Single Particle Analysis and Electron Micrograph Analysis2017-07-21T14:29:16Z
eman2.12stampede.tacc.xsede.orgEMAN2 is a scientific image processing suite for single particle reconstruction from cryoEM.2017-07-21T14:29:16Z
eman22.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
emboss6.5.7comet.sdsc.xsede.org2017-07-21T15:01:01Z
emboss6.6.0bridges.psc.xsede.org2017-07-21T15:04:51Z
ericscript0.5.5bridges.psc.xsede.org2017-07-21T15:04:51Z
espresso5.4.0stampede.tacc.xsede.orgintegrated suite of computer codes for electronic structure calculations and material modeling at the nanoscale.2017-07-21T14:29:15Z
eudev3.1.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
expat2.1.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
express1.3.0stampede.tacc.xsede.orgexpress - Streaming quantification for high-throughput sequencing2017-07-21T14:29:15Z
falcon0.4.1bridges.psc.xsede.org2017-07-21T15:04:51Z
fasta-splitter0.2.4bridges.psc.xsede.org2017-07-21T15:04:51Z
fastq-splitter0.1.2bridges.psc.xsede.org2017-07-21T15:04:51Z
fastqc0.10.1stampede.tacc.xsede.orgfastqc - A Quality Control application for FastQ files2017-07-21T14:29:15Z
fastqc0.11.3bridges.psc.xsede.org2017-07-21T15:04:51Z
fastqc0.11.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
fastqc0.11.5stampede.tacc.xsede.orgfastqc - A Quality Control application for FastQ files2017-07-21T14:29:15Z
fasttree2.1.8comet.sdsc.xsede.org2017-07-21T15:01:01Z
fastx0.0.14bridges.psc.xsede.org2017-07-21T15:04:51Z
fastx0.0.14comet.sdsc.xsede.org2017-07-21T15:01:01Z
fastx_toolkit0.0.13.2stampede.tacc.xsede.orgFASTX Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing.2017-07-21T14:29:16Z
ffmpeg2.1.4maverick.tacc.xsede.orgA library to record, convert and stream audio and video.2017-07-21T14:28:46Z
ffmpeg2.1.4stampede.tacc.xsede.orgA library to record, convert and stream audio and video.2017-07-21T14:29:16Z
ffmpeg2.8.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
ffmpeg3.1.1bridges.psc.xsede.org2017-07-21T15:04:51Z
fftw2.1.5comet.sdsc.xsede.org2017-07-21T15:01:01Z
fftw3.3.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
fftw22.1.5stampede.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2017-07-21T14:29:15Z
fftw22.1.5stampede2.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2017-07-21T14:56:49Z
fftw33.3.4bridges.psc.xsede.org2017-07-21T15:04:51Z
fftw33.3.4stampede.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2017-07-21T14:29:15Z
fftw33.3.4wrangler.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2017-07-21T14:46:27Z
fftw33.3.6stampede2.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2017-07-21T14:56:49Z
fixesproto5.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
flash1.2.11bridges.psc.xsede.org2017-07-21T15:04:51Z
flex2.5.39xstream.stanford.xsede.org2017-07-21T14:56:54Z
flex2.6.0bridges.psc.xsede.org2017-07-21T15:04:51Z
fluentfluentbridges.psc.xsede.orgFluent is part of ANSYS. Load the ANSYS module to have access to Fluent.2017-07-21T15:04:51Z
fontconfig2.11.94xstream.stanford.xsede.org2017-07-21T14:56:54Z
fontsproto2.1.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
foss2015.05xstream.stanford.xsede.org2017-07-21T14:56:54Z
fraggenescan1.20bridges.psc.xsede.org2017-07-21T15:04:51Z
frealign9.11comet.sdsc.xsede.org2017-07-21T15:01:01Z
freesurfer5.3.0stampede.tacc.xsede.orgfreesurfer - a set of tools for analysis and visualization of structural and functional brain imaging data. Common commands include recon-all, etc.2017-07-21T14:29:16Z
freetype2.6xstream.stanford.xsede.org2017-07-21T14:56:54Z
fsa1.15.9comet.sdsc.xsede.org2017-07-21T15:01:01Z
ftools6.18bridges.psc.xsede.org2017-07-21T15:04:51Z
ga5.3stampede.tacc.xsede.orgGlobal Array library and include files2017-07-21T14:29:15Z
gamess05_2013stampede.tacc.xsede.orgGeneral ab initio quantum chemistry package2017-07-21T14:29:15Z
gamess2014.12comet.sdsc.xsede.org2017-07-21T15:01:01Z
gamessV2014bridges.psc.xsede.org2017-07-21T15:04:51Z
garli2.01comet.sdsc.xsede.org2017-07-21T15:01:01Z
gateway-usage-reporting1.0comet.sdsc.xsede.org gateway-usage-reporting/1.0 adds gateway-usage-reporting tool to paths in the login shell environment2017-07-21T15:01:01Z
gateway-usage-reporting1.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
gateway-usage-reporting1.0wrangler.tacc.xsede.orgadds gateway-usage-reporting tool to paths in the login shell environment2017-07-21T14:46:27Z
gateway-usage-reporting2.0bridges.psc.xsede.orgadds XSEDE gateway-submit_attributes tool to paths in the login shell environment2017-07-21T15:04:51Z
gateway-usage-reporting2.0stampede.tacc.xsede.orgadds gateway-usage-reporting tool to paths in the login shell environment2017-07-21T14:29:15Z
gateway-usage-reporting2.0stampede2.tacc.xsede.orgadds gateway-usage-reporting tool to paths in the login shell environment2017-07-21T14:56:49Z
gateway-usage-reporting2.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
gateway-usage-reporting2.0wrangler.tacc.xsede.orgadds gateway-usage-reporting tool to paths in the login shell environment2017-07-21T14:46:27Z
gatk2.3.9stampede.tacc.xsede.org2017-07-21T14:29:16Z
gatk2.5.2stampede.tacc.xsede.org2017-07-21T14:29:16Z
gatk2.7.2stampede.tacc.xsede.org2017-07-21T14:29:16Z
gatk3.2.2stampede.tacc.xsede.org2017-07-21T14:29:16Z
gatk3.5bridges.psc.xsede.orgA Genome Analysis Toolkit for variant discovery and genotyping.2017-07-21T15:04:51Z
gatk3.5.0stampede.tacc.xsede.orgThe Genome Analysis Toolkit or GATK is a software package developed at the Broad Institute to analyze high-throughput sequencing data.2017-07-21T14:29:16Z
gatk3.6bridges.psc.xsede.orgA Genome Analysis Toolkit for variant discovery and genotyping.2017-07-21T15:04:51Z
gatk3.7bridges.psc.xsede.orgA Genome Analysis Toolkit for variant discovery and genotyping.2017-07-21T15:04:51Z
gaussian09stampede.tacc.xsede.orgGaussian 09 quantum chemistry package2017-07-21T14:29:15Z
gaussian09.D.01bridges.psc.xsede.org2017-07-21T15:04:51Z
gaussian09.D.01comet.sdsc.xsede.org2017-07-21T15:01:01Z
gaussian09.E.01bridges.psc.xsede.org2017-07-21T15:04:51Z
gaussian16.A.03comet.sdsc.xsede.org2017-07-21T15:01:01Z
gaussianG16bridges.psc.xsede.org2017-07-21T15:04:51Z
gcc4.4.6stampede.tacc.xsede.org2017-07-21T14:29:16Z
gcc4.6.3stampede.tacc.xsede.org2017-07-21T14:29:16Z
gcc4.7.1maverick.tacc.xsede.org2017-07-21T14:28:46Z
gcc4.7.1stampede.tacc.xsede.org2017-07-21T14:29:16Z
gcc4.7.2bridges.psc.xsede.org2017-07-21T15:04:51Z
gcc4.8.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
gcc4.8.4bridges.psc.xsede.org2017-07-21T15:04:51Z
gcc4.9.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
gcc4.9.1maverick.tacc.xsede.org2017-07-21T14:28:46Z
gcc4.9.1stampede.tacc.xsede.org2017-07-21T14:29:16Z
gcc4.9.1wrangler.tacc.xsede.org2017-07-21T14:46:27Z
gcc4.9.3maverick.tacc.xsede.org2017-07-21T14:28:46Z
gcc4.9.3stampede.tacc.xsede.org2017-07-21T14:29:16Z
gcc5.3.0bridges.psc.xsede.org2017-07-21T15:04:51Z
gcc5.4.0stampede2.tacc.xsede.org2017-07-21T14:56:49Z
gcc6.3.0bridges.psc.xsede.org2017-07-21T15:04:51Z
gcc6.3.0wrangler.tacc.xsede.org2017-07-21T14:46:27Z
gcc7.1.0stampede2.tacc.xsede.org2017-07-21T14:56:49Z
gdal2.2.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
genome-music0.4.1bridges.psc.xsede.org2017-07-21T15:04:51Z
genomemapper0.4.3stampede.tacc.xsede.orgGenomeMapper - short read mapping tool2017-07-21T14:29:15Z
geos3.6.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
gettext0.19.4xstream.stanford.xsede.org2017-07-21T14:56:54Z
gffread0.9.8cbridges.psc.xsede.orggffread - gffread can be used to validate, filter, convert and perform various other operations on GFF files2017-07-21T15:04:51Z
gflags2.1.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
gflags2.2.0bridges.psc.xsede.org2017-07-21T15:04:51Z
git2.10.2bridges.psc.xsede.org2017-07-21T15:04:51Z
git2.4.1wrangler.tacc.xsede.orgFast Version Control System2017-07-21T14:46:27Z
git2.4.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
git2.7.0maverick.tacc.xsede.orgFast Version Control System2017-07-21T14:28:46Z
git2.7.0stampede.tacc.xsede.orgFast Version Control System2017-07-21T14:29:16Z
git2.9.0stampede2.tacc.xsede.orgFast Version Control System2017-07-21T14:56:49Z
glimmer3.02bridges.psc.xsede.orgGlimmer is a system for finding genes in microbial DNA, especially the genomes of bacteria, archaea, and viruses.2017-07-21T15:04:51Z
glimmerhmm3.0.4bridges.psc.xsede.orgGlimmerHMM is a gene finder based on a Generalized Hidden Markov Model (GHMM)2017-07-21T15:04:51Z
globus5.0.4-r1supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
globus5.2.3stampede.tacc.xsede.orgGlobus Software Package2017-07-21T14:29:15Z
globus5.2.5comet.sdsc.xsede.org2017-07-21T15:01:01Z
globus5.7-8supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
globus6.0maverick.tacc.xsede.orgGlobus Software Package2017-07-21T14:28:46Z
globus6.0stampede.tacc.xsede.orgGlobus Software Package2017-07-21T14:29:15Z
globus6.0stampede2.tacc.xsede.orgGlobus Software Package2017-07-21T14:56:49Z
globus6.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
globus6.0wrangler.tacc.xsede.orgGlobus Software Package2017-07-21T14:46:27Z
glog0.3.4xstream.stanford.xsede.org2017-07-21T14:56:54Z
glog0.3.5bridges.psc.xsede.org2017-07-21T15:04:51Z
glproto1.4.17xstream.stanford.xsede.org2017-07-21T14:56:54Z
gmake4.0stampede.tacc.xsede.orgGNU Make2017-07-21T14:29:16Z
gmap20130911stampede.tacc.xsede.orgGMAP: a genomic mapping and alignment program for mRNA and EST sequences2017-07-21T14:29:15Z
gmap-gsnap20140220stampede.tacc.xsede.orgGMAP: a genomic mapping and alignment program for mRNA and EST sequences2017-07-21T14:29:15Z
gmap_gsnap20151231comet.sdsc.xsede.org2017-07-21T15:01:01Z
gmp6.0.0acomet.sdsc.xsede.org2017-07-21T15:01:01Z
gmt5.1.1stampede.tacc.xsede.orginterpreted programming language2017-07-21T14:29:15Z
gmt5.2.1stampede.tacc.xsede.orgGeneric Mapping Tools: Tools for manipulating geographic and Cartesian data sets2017-07-21T14:29:15Z
gmt5.3.3stampede2.tacc.xsede.orgGeneric Mapping Tools: Tools for manipulating geographic and Cartesian data sets2017-07-21T14:56:49Z
gnu4.9.2comet.sdsc.xsede.orgUnloading compiler-dependent module $app2017-07-21T15:01:01Z
gnu_parallel20160822bridges.psc.xsede.orgGNU parallel is a shell tool for executing jobs in parallel using one or more computers.2017-07-21T15:04:51Z
gnuparallel20170122supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
gnutools2.69comet.sdsc.xsede.org2017-07-21T15:01:01Z
gompi2015.05xstream.stanford.xsede.org2017-07-21T14:56:54Z
gperf3.0.4xstream.stanford.xsede.org2017-07-21T14:56:54Z
grace5.1.23stampede.tacc.xsede.orgA portable GUI driven interactive data and function plotting utility. This GUI must be run on the development or vis nodes or your account may be temporarily suspended.2017-07-21T14:29:15Z
grace5.1.25bridges.psc.xsede.org2017-07-21T15:04:51Z
grace5.1.25comet.sdsc.xsede.org2017-07-21T15:01:01Z
graphlan0.9.7bridges.psc.xsede.orgGraPhlAn is a software tool for producing high-quality circular representations of taxonomic and phylogenetic trees. It focuses on concise, integrative, informative, and publication-ready representations of phylogenetically- and taxonomically-driven investigation.2017-07-21T15:04:51Z
gromacs2016.3stampede2.tacc.xsede.orgmolecular dynamics simulation package2017-07-21T14:56:49Z
gromacs2016_cpubridges.psc.xsede.org2017-07-21T15:04:51Z
gromacs2016_gpubridges.psc.xsede.org2017-07-21T15:04:51Z
gromacs5.0.6stampede.tacc.xsede.orgmolecular dynamics simulation package2017-07-21T14:29:15Z
gromacs5.1.2bridges.psc.xsede.org2017-07-21T15:04:51Z
gromacs5.1.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
gromacs5.1.2stampede.tacc.xsede.orgmolecular dynamics simulation package2017-07-21T14:29:15Z
gromacs5.1.2stampede2.tacc.xsede.orgmolecular dynamics simulation package2017-07-21T14:56:49Z
gsissh7.1p2maverick.tacc.xsede.orgGlobus GSI OpenSSH utility2017-07-21T14:28:46Z
gsissh7.1p2stampede.tacc.xsede.orgGlobus GSI OpenSSH utility2017-07-21T14:29:15Z
gsissh7.1p2stampede2.tacc.xsede.orgGlobus GSI OpenSSH utility2017-07-21T14:56:49Z
gsissh7.1p2wrangler.tacc.xsede.orgGlobus GSI OpenSSH utility2017-07-21T14:46:27Z
gsl1.16comet.sdsc.xsede.org2017-07-21T15:01:01Z
gsl1.16maverick.tacc.xsede.orgprovides wide range of mathematical routines such as random number generators, special functions and least-squares fitting.2017-07-21T14:28:46Z
gsl1.16stampede.tacc.xsede.orgprovides wide range of mathematical routines such as random number generators, special functions and least-squares fitting.2017-07-21T14:29:15Z
gsl1.16wrangler.tacc.xsede.orgprovides wide range of mathematical routines such as random number generators, special functions and least-squares fitting.2017-07-21T14:46:27Z
gsl2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
gsl2.3stampede2.tacc.xsede.org2017-07-21T14:56:49Z
gsnap20120720stampede.tacc.xsede.orggsnap - Genomic Short-read Nucleotide Alignment Program2017-07-21T14:29:16Z
guile2.0.11comet.sdsc.xsede.org2017-07-21T15:01:01Z
gulp4.3stampede.tacc.xsede.orgGulp - A lattice dynamics program2017-07-21T14:29:15Z
gx-map0.5.3.3maverick.tacc.xsede.orgTeraGrid GX-Map utility2017-07-21T14:28:46Z
gx-map0.5.3.3-r1supermic.cct-lsu.xsede.orgTeraGrid GX Map utility2017-07-21T14:40:38Z
h5utils1.12.1stampede.tacc.xsede.orgcontains several programs to post-process HDF54 data.2017-07-21T14:29:15Z
hadoop2.7.2bridges.psc.xsede.orgA Big Data processing framework.2017-07-21T15:04:51Z
hadoop-paths2.5.0wrangler.tacc.xsede.org2017-07-21T14:46:27Z
hdf42.11comet.sdsc.xsede.org2017-07-21T15:01:01Z
hdf51.10.1_gnubridges.psc.xsede.org2017-07-21T15:04:51Z
hdf51.8.12maverick.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Serial Version).2017-07-21T14:28:46Z
hdf51.8.14comet.sdsc.xsede.orgmust specify one of the following mpi modules: mvapich2_ib openmpi_ib2017-07-21T15:01:01Z
hdf51.8.14wrangler.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Serial Version).2017-07-21T14:46:27Z
hdf51.8.16stampede.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Serial Version).2017-07-21T14:29:15Z
hdf51.8.16stampede2.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Serial Version).2017-07-21T14:56:49Z
hdf51.8.16_gnubridges.psc.xsede.org2017-07-21T15:04:51Z
hdf51.8.16_intelbridges.psc.xsede.org2017-07-21T15:04:51Z
hisat22.0.4bridges.psc.xsede.org2017-07-21T15:04:51Z
hmmer2.3.2bridges.psc.xsede.org2017-07-21T15:04:51Z
hmmer3.1b2bridges.psc.xsede.org2017-07-21T15:04:51Z
hmmer3.1b2comet.sdsc.xsede.org2017-07-21T15:01:01Z
homer4.9_2-20-2017bridges.psc.xsede.orgA suite of tools for Motif Discovery and next-gen sequencing analysis2017-07-21T15:04:51Z
hpctoolkit2016.12stampede2.tacc.xsede.orgProfiler2017-07-21T14:56:49Z
hpctoolkit5.3.2stampede.tacc.xsede.orgProfiler2017-07-21T14:29:15Z
hpnssh7.5p1-hpn14v12bridges.psc.xsede.orgHPN-enabled OpenSSH clients2017-07-21T15:04:51Z
htseq0.6.1bridges.psc.xsede.orgHTSeq is a Python package that provides infrastructure to process data from high-throughput sequencing assays.2017-07-21T15:04:51Z
htseq0.6.1p1comet.sdsc.xsede.org2017-07-21T15:01:01Z
htseq0.6.1p1stampede.tacc.xsede.orgHTSeq - Analysing high-throughput sequencing data with Python2017-07-21T14:29:15Z
humann20.10.0bridges.psc.xsede.orgThe HMP Unified Metabolic Analysis Network 22017-07-21T15:04:51Z
hwloc1.10.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
hwloc1.10.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
hypre2.10.0b-LargeScalestampede.tacc.xsede.orgLibrary of scalable solvers2017-07-21T14:29:15Z
hypre2.10.0b-SmallScalestampede.tacc.xsede.orgLibrary of scalable solvers2017-07-21T14:29:15Z
hypre2.11stampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
hypre2.11-complexstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
hypre2.11-complexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
hypre2.11-cxxstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
hypre2.11-cxxcomplexstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
hypre2.11-cxxcomplexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
hypre2.11-cxxdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
hypre2.11-debugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
hypre2.11.1stampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
hypre2.11.1-complexstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
hypre2.11.1-complexdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
hypre2.11.1-cxxstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
hypre2.11.1-cxxcomplexstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
hypre2.11.1-cxxcomplexdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
hypre2.11.1-cxxdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
hypre2.11.1-debugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
icc16.0.2bridges.psc.xsede.org2017-07-21T15:04:51Z
icc16.0.3bridges.psc.xsede.org2017-07-21T15:04:51Z
icc2015.5.223-GNU-4.9.2-2.25xstream.stanford.xsede.org2017-07-21T14:56:54Z
iccifort2015.5.223-GNU-4.9.2-2.25xstream.stanford.xsede.org2017-07-21T14:56:54Z
idba1.1.3stampede.tacc.xsede.orgDe novo assembler for short read sequencing data2017-07-21T14:29:15Z
idba-tran1.1.1bridges.psc.xsede.org2017-07-21T15:04:51Z
idba-tran1.1.1_longbridges.psc.xsede.org2017-07-21T15:04:51Z
idba-ud1.1.1bridges.psc.xsede.org2017-07-21T15:04:51Z
idba-ud1.1.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
idev1.0maverick.tacc.xsede.orgInteractive Access to Compute Node(s) for Development via Batch System2017-07-21T14:28:46Z
idev1.3stampede.tacc.xsede.orgInteractive Access to Compute Node(s) for Development via Batch System2017-07-21T14:29:15Z
idev1.3.0wrangler.tacc.xsede.orgInteractive Access to Compute Node(s) for Development via Batch System2017-07-21T14:46:27Z
idev1.5.2stampede2.tacc.xsede.orgInteractive Access to Compute Node(s) for Development via Batch System2017-07-21T14:56:49Z
idl7.0.6maverick.tacc.xsede.orgIDL interactive graphing and visualization toolkit2017-07-21T14:28:46Z
idl7.0.6stampede.tacc.xsede.org2017-07-21T14:29:15Z
idl7.0.6stampede.tacc.xsede.orgIDL interactive graphing and visualization toolkit2017-07-21T14:29:15Z
idl8.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
idl8.4maverick.tacc.xsede.org2017-07-21T14:28:46Z
idl8.4stampede.tacc.xsede.org2017-07-21T14:29:15Z
idl8.4stampede2.tacc.xsede.org2017-07-21T14:56:49Z
idl8.4wrangler.tacc.xsede.org2017-07-21T14:46:27Z
ifort2015.5.223-GNU-4.9.2-2.25xstream.stanford.xsede.org2017-07-21T14:56:54Z
igvtools2.3.26stampede.tacc.xsede.orgThe Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets. IGVtools is for preprocessing data files2017-07-21T14:29:15Z
iimpi7.3.5-GNU-4.9.2-2.25xstream.stanford.xsede.org2017-07-21T14:56:54Z
imkl11.2.4.223xstream.stanford.xsede.org2017-07-21T14:56:54Z
impi17.0.3stampede2.tacc.xsede.orgIntel MPI Library (C/C++/Fortran for x86_64)2017-07-21T14:56:49Z
impi4.1.3.049maverick.tacc.xsede.orgIntel MPI Library (C/C++/Fortran for x86_64)2017-07-21T14:28:46Z
impi5.0.2stampede.tacc.xsede.orgIntel MPI Library (C/C++/Fortran for x86_64)2017-07-21T14:29:15Z
impi5.0.3maverick.tacc.xsede.orgIntel MPI Library (C/C++/Fortran for x86_64)2017-07-21T14:28:46Z
impi5.0.3wrangler.tacc.xsede.orgIntel MPI Library (C/C++/Fortran for x86_64)2017-07-21T14:46:27Z
impi5.0.3.049xstream.stanford.xsede.org2017-07-21T14:56:54Z
infernal1.1.2bridges.psc.xsede.orgInfernal - Sequence analysis using profiles of RNA sequence and secondary structure consensus2017-07-21T15:04:51Z
inputproto2.3.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
intel13.0.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
intel13.0.2.146stampede.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2017-07-21T14:29:15Z
intel13.1.3supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
intel14.0.1.106maverick.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2017-07-21T14:28:46Z
intel14.0.1.106stampede.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2017-07-21T14:29:15Z
intel14.0.2supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
intel15.0.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
intel15.0.2stampede.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2017-07-21T14:29:15Z
intel15.0.3maverick.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2017-07-21T14:28:46Z
intel15.0.3wrangler.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2017-07-21T14:46:27Z
intel16.0.3stampede2.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2017-07-21T14:56:49Z
intel17.0.4stampede2.tacc.xsede.orgIntel Compiler Family (C/C++/Fortran for x86_64)2017-07-21T14:56:49Z
intel17.4bridges.psc.xsede.org2017-07-21T15:04:51Z
intel2013xstream.stanford.xsede.org2017-07-21T14:56:54Z
intel2013_sp1.2.144comet.sdsc.xsede.orgUnloading compiler-dependent module $app2017-07-21T15:01:01Z
intel2015.2.164comet.sdsc.xsede.orgUnloading compiler-dependent module $app2017-07-21T15:01:01Z
intel2015.5.223xstream.stanford.xsede.org2017-07-21T14:56:54Z
intel2016xstream.stanford.xsede.org2017-07-21T14:56:54Z
intelcompilersbridges.psc.xsede.org2017-07-21T15:04:51Z
intelcompilers-2017bridges.psc.xsede.org2017-07-21T15:04:51Z
inteldefaultxstream.stanford.xsede.org2017-07-21T14:56:54Z
intelmpi-sh5.1.3.181bridges.psc.xsede.org2017-07-21T15:04:51Z
intelpython2.7.12bridges.psc.xsede.org2017-07-21T15:04:51Z
intelpython3.5.2bridges.psc.xsede.org2017-07-21T15:04:52Z
intltool0.51.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
ipm0.983stampede.tacc.xsede.orgIntegrated Performance Monitoring2017-07-21T14:29:15Z
ipm2.0.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
irods3.3.1stampede.tacc.xsede.orgirods2017-07-21T14:29:15Z
irods4wrangler.tacc.xsede.orgirods2017-07-21T14:46:27Z
irods4.0.1stampede2.tacc.xsede.org2017-07-21T14:56:49Z
itac17.0.3stampede2.tacc.xsede.orgIntel Trace Analyzer and Collector2017-07-21T14:56:49Z
itac9.0.3stampede.tacc.xsede.orgIntel Trace Analyzer and Collector2017-07-21T14:29:16Z
jasper1.900.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
java1.7.0supermic.cct-lsu.xsede.orgJava2017-07-21T14:40:38Z
javajdk8u73bridges.psc.xsede.org2017-07-21T15:04:52Z
java-paths1.7.0wrangler.tacc.xsede.org2017-07-21T14:46:27Z
java641.8.0wrangler.tacc.xsede.org2017-07-21T14:46:27Z
java641.8.0wrangler.tacc.xsede.orgJava2017-07-21T14:46:27Z
java7jdk7u80bridges.psc.xsede.org2017-07-21T15:04:52Z
jdk321.7.0maverick.tacc.xsede.orgJava2017-07-21T14:28:46Z
jdk321.7.0stampede.tacc.xsede.orgJava2017-07-21T14:29:15Z
jdk321.7.0wrangler.tacc.xsede.orgJava2017-07-21T14:46:27Z
jdk321.8.0maverick.tacc.xsede.orgJava2017-07-21T14:28:46Z
jdk321.8.0stampede.tacc.xsede.orgJava2017-07-21T14:29:15Z
jdk321.8.0wrangler.tacc.xsede.orgJava2017-07-21T14:46:27Z
jdk641.8.0stampede.tacc.xsede.orgJava2017-07-21T14:29:15Z
jdk641.8.0wrangler.tacc.xsede.orgJava2017-07-21T14:46:27Z
jellyfish1.1.11bridges.psc.xsede.orgSoftware to count k-mers in DNA sequences2017-07-21T15:04:52Z
jellyfish2.2.6wrangler.tacc.xsede.orgA fast, lock-free approach for efficient parallel counting of occurrences of k-mers.2017-07-21T14:46:27Z
jellyfish22.2.6bridges.psc.xsede.orgSoftware to count k-mers in DNA sequences2017-07-21T15:04:52Z
jpeg9bbridges.psc.xsede.org2017-07-21T15:04:52Z
julia0.6.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
kallisto0.43.0bridges.psc.xsede.orgKallisto is a program for quantifying abundances of transcripts from RNA-Seq data.2017-07-21T15:04:52Z
kbproto1.0.7xstream.stanford.xsede.org2017-07-21T14:56:54Z
keras1.1.2bridges.psc.xsede.org2017-07-21T15:04:52Z
keras2.0.4bridges.psc.xsede.org2017-07-21T15:04:52Z
keras2.0.6_anacondabridges.psc.xsede.org2017-07-21T15:04:52Z
keras2.0.6_anaconda_nogpubridges.psc.xsede.org2017-07-21T15:04:52Z
khmer2.0bridges.psc.xsede.orgA set of command-line tools for working with DNA shotgun sequencing data2017-07-21T15:04:52Z
kraken0.10.5-betabridges.psc.xsede.orgA taxonomic sequence classifier that assigns taxonomic labels to short DNA reads2017-07-21T15:04:52Z
lammps10Feb15stampede.tacc.xsede.orgMolecular Dynamics Chemistry Package2017-07-21T14:29:15Z
lammps17Nov16stampede2.tacc.xsede.orgMolecular Dynamics Chemistry Package2017-07-21T14:56:49Z
lammps20160216comet.sdsc.xsede.org2017-07-21T15:01:01Z
lammps31Mar17stampede2.tacc.xsede.orgMolecular Dynamics Chemistry Package2017-07-21T14:56:49Z
lapack3.6.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
lasagne0.1bridges.psc.xsede.org2017-07-21T15:04:52Z
lastz1.03.02stampede.tacc.xsede.orgAn efficient pairwise aligner2017-07-21T14:29:16Z
launcher1.4stampede.tacc.xsede.orgUtility for starting parametric job sweeps2017-07-21T14:29:15Z
launcher2.0maverick.tacc.xsede.orgUtility for starting parametric job sweeps2017-07-21T14:28:46Z
launcher2.0stampede.tacc.xsede.orgUtility for starting parametric job sweeps2017-07-21T14:29:15Z
launcher2.0wrangler.tacc.xsede.orgUtility for starting parametric job sweeps2017-07-21T14:46:27Z
launcher3.1stampede2.tacc.xsede.orgUtility for starting parametric job sweeps2017-07-21T14:56:49Z
leveldb1.18bridges.psc.xsede.org2017-07-21T15:04:52Z
leveldb1.20bridges.psc.xsede.org2017-07-21T15:04:52Z
libGLU9.0.0-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
libICE1.0.8xstream.stanford.xsede.org2017-07-21T14:56:54Z
libSM1.2.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
libX111.6.3-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXau1.0.8xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXcursor1.1.14-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXdamage1.1.4xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXdmcp1.1.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXext1.3.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXfixes5.0.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXfont1.5.1-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXft2.3.2-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXi1.7.4xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXinerama1.1.3-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXmu1.1.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXrandr1.5.0-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXrender0.9.9-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
libXt1.1.5xstream.stanford.xsede.org2017-07-21T14:56:54Z
libdrm2.4.65xstream.stanford.xsede.org2017-07-21T14:56:54Z
libfabric1.4.2stampede2.tacc.xsede.orgFabric communication services2017-07-21T14:56:49Z
libffi3.0.13xstream.stanford.xsede.org2017-07-21T14:56:54Z
libffi3.2.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
libfontenc1.1.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
libgpuarray0.6.8xstream.stanford.xsede.org2017-07-21T14:56:54Z
libjpeg-turbo1.4.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
libmatheval1.1.11xstream.stanford.xsede.org2017-07-21T14:56:54Z
libpciaccess0.13.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
libpng1.6.17xstream.stanford.xsede.org2017-07-21T14:56:54Z
libpng1.6.21xstream.stanford.xsede.org2017-07-21T14:56:54Z
libpthread-stubs0.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
libreadline6.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
libsodium1.0.8xstream.stanford.xsede.org2017-07-21T14:56:54Z
libtool2.4.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
libtool2.4.6xstream.stanford.xsede.org2017-07-21T14:56:54Z
libunistring0.9.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
libxc2.2.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
libxc2.2.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
libxcb1.11.1-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
libxkbcommon0.5.0-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
libxml22.9.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
libxml22.9.2-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
libxslt1.1.28xstream.stanford.xsede.org2017-07-21T14:56:54Z
libxsmm1.4.4xstream.stanford.xsede.org2017-07-21T14:56:54Z
llvm3.3stampede.tacc.xsede.orga collection of modular and reusable compiler and toolchain technologies.2017-07-21T14:29:15Z
llvm3.6.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
lmod6.0.15xstream.stanford.xsede.orgLmod: An Environment Module System2017-07-21T14:56:54Z
lmod7.3.26wrangler.tacc.xsede.orgAn environment module system2017-07-21T14:46:27Z
lmod7.4.1maverick.tacc.xsede.orgAn environment module system2017-07-21T14:28:46Z
lmod7.4.1stampede.tacc.xsede.orgAn environment module system2017-07-21T14:29:15Z
lmod7.4.1wrangler.tacc.xsede.orgAn environment module system2017-07-21T14:46:27Z
lmod7.4.12stampede2.tacc.xsede.orgAn environment module system2017-07-21T14:56:49Z
ls-dynaR6_1_1_79036bridges.psc.xsede.org2017-07-21T15:04:52Z
ls-dynaR7_1_2_95028bridges.psc.xsede.org2017-07-21T15:04:52Z
ls-dynaR8_1_105897bridges.psc.xsede.org2017-07-21T15:04:52Z
ls-dynaR9_0_1_109912bridges.psc.xsede.org2017-07-21T15:04:52Z
ls-dynaR9_1_113698bridges.psc.xsede.org2017-07-21T15:04:52Z
ltools1.0stampede.tacc.xsede.org2017-07-21T14:29:15Z
ltools1.2stampede2.tacc.xsede.org2017-07-21T14:56:49Z
luatools1.1maverick.tacc.xsede.orgLibrary tools2017-07-21T14:28:46Z
luatools1.1stampede.tacc.xsede.orgLibrary tools2017-07-21T14:29:15Z
luatools1.1wrangler.tacc.xsede.orgLibrary tools2017-07-21T14:46:27Z
lz41.7.5stampede.tacc.xsede.orgLZ4 is a fast compression algorithm2017-07-21T14:29:16Z
lz41.7.5wrangler.tacc.xsede.orgLZ4 is a fast compression algorithm2017-07-21T14:46:27Z
mach1.0.18stampede.tacc.xsede.orgMarkov Chain based haplotyper2017-07-21T14:29:15Z
macs1.4.3bridges.psc.xsede.orgModel Based Analysis for ChIP-Seq data (MACS) for identifying transcription factor binding sites.2017-07-21T15:04:52Z
macs22.1.0stampede.tacc.xsede.orgMACS2 - Model-based Analysis of ChIP-Seq2017-07-21T14:29:15Z
macs22.1.1.20160309stampede.tacc.xsede.orgMACS2 - Model-based Analysis of ChIP-Seq2017-07-21T14:29:15Z
macse1.2bridges.psc.xsede.org2017-07-21T15:04:52Z
mafft7.017stampede.tacc.xsede.orgMultiple alignment program for amino acid or nucleotide sequences2017-07-21T14:29:16Z
mafft7.187comet.sdsc.xsede.org2017-07-21T15:01:01Z
mafft7.300bridges.psc.xsede.org2017-07-21T15:04:52Z
makedepend1.0.5xstream.stanford.xsede.org2017-07-21T14:56:54Z
mallet2.0.8RC3bridges.psc.xsede.org2017-07-21T15:04:52Z
malt0.3.8bridges.psc.xsede.orgMEGAN alignment tool, is a blast-like sequence alignment and analysis tool designed for processing high-throughput sequencing data, especially in the context of metagenomics.2017-07-21T15:04:52Z
mapsembler22.2.4bridges.psc.xsede.orgTargeted sequence assembler2017-07-21T15:04:52Z
masurca3.1.3bridges.psc.xsede.org2017-07-21T15:04:52Z
mathematica10.1supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
mathematica10.2wrangler.tacc.xsede.orgMathematica by Wolfram2017-07-21T14:46:27Z
mathematica10.4stampede.tacc.xsede.orgMathematica by Wolfram2017-07-21T14:29:16Z
mathematica10.4wrangler.tacc.xsede.orgMathematica by Wolfram2017-07-21T14:46:27Z
mathematica11.0bridges.psc.xsede.orgWolfram's Mathematica,Symbolic Algebra2017-07-21T15:04:52Z
mathematica9.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
matlab2013amaverick.tacc.xsede.orgMatlab 2013a from MathWorks2017-07-21T14:28:46Z
matlab2013astampede.tacc.xsede.orgMatlab 2013a from MathWorks2017-07-21T14:29:15Z
matlab2013bstampede.tacc.xsede.orgMatlab 2013b from MathWorks2017-07-21T14:29:15Z
matlab2014astampede.tacc.xsede.orgMatlab 2014a from MathWorks2017-07-21T14:29:15Z
matlab2014bstampede.tacc.xsede.orgMatlab 2014b from MathWorks2017-07-21T14:29:15Z
matlab2015amaverick.tacc.xsede.orgMatlab 2015a from MathWorks2017-07-21T14:28:46Z
matlab2015astampede.tacc.xsede.orgMatlab 2015a from MathWorks2017-07-21T14:29:15Z
matlab2015awrangler.tacc.xsede.orgMatlab 2015a from MathWorks2017-07-21T14:46:27Z
matlab2015bstampede.tacc.xsede.orgMatlab 2015b from MathWorks2017-07-21T14:29:15Z
matlab2016astampede.tacc.xsede.orgMatlab 2016a from MathWorks2017-07-21T14:29:15Z
matlab2016bcomet.sdsc.xsede.org2017-07-21T15:01:01Z
matlab2016bstampede.tacc.xsede.orgMatlab 2016b from MathWorks2017-07-21T14:29:15Z
matlab2017astampede2.tacc.xsede.orgMatlab 2017a from MathWorks2017-07-21T14:56:49Z
matlabMCR_R2013abridges.psc.xsede.org2017-07-21T15:04:52Z
matlabR2016abridges.psc.xsede.org2017-07-21T15:04:52Z
matlabR2017abridges.psc.xsede.org2017-07-21T15:04:52Z
matlabr2013asupermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
matlabr2015bsupermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
matlabr2017asupermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
matplotlib1.5.3-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
matt1.00comet.sdsc.xsede.org2017-07-21T15:01:01Z
mauve2.3.1supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
maven3.3.9bridges.psc.xsede.org2017-07-21T15:04:52Z
maxbin2.1.1bridges.psc.xsede.org2017-07-21T15:04:52Z
mcr9.0.1_2016abridges.psc.xsede.org2017-07-21T15:04:52Z
mcr9.2stampede2.tacc.xsede.orgMatlab v9.2 Compiler Runtime from MathWorks2017-07-21T14:56:49Z
mcrv81maverick.tacc.xsede.orgMatlab v81 Compiler Runtime from MathWorks2017-07-21T14:28:46Z
mcrv81stampede.tacc.xsede.orgMatlab v81 Compiler Runtime from MathWorks2017-07-21T14:29:15Z
mcrv82stampede.tacc.xsede.orgMatlab v82 Compiler Runtime from MathWorks2017-07-21T14:29:15Z
mcrv83stampede.tacc.xsede.orgMatlab v83 Compiler Runtime from MathWorks2017-07-21T14:29:15Z
mcrv84stampede.tacc.xsede.orgMatlab v84 for 2014b Compiler Runtime from MathWorks2017-07-21T14:29:15Z
mcrv85maverick.tacc.xsede.orgMatlab v85 Compiler Runtime from MathWorks2017-07-21T14:28:46Z
mcrv85stampede.tacc.xsede.orgMatlab v85 Compiler Runtime from MathWorks2017-07-21T14:29:15Z
mcrv85wrangler.tacc.xsede.orgMatlab v85 Compiler Runtime from MathWorks2017-07-21T14:46:27Z
mcrv90stampede.tacc.xsede.orgMatlab v90 Compiler Runtime from MathWorks2017-07-21T14:29:15Z
mcrv901stampede.tacc.xsede.orgMatlab v90.1 Compiler Runtime from MathWorks2017-07-21T14:29:15Z
mcrv91stampede.tacc.xsede.orgMatlab v91 Compiler Runtime from MathWorks2017-07-21T14:29:15Z
mct2.9.0bridges.psc.xsede.org2017-07-21T15:04:52Z
meep1.3stampede.tacc.xsede.orgMeep is a free finite-difference time-domain simulation software package2017-07-21T14:29:15Z
megahit1.1.1bridges.psc.xsede.orgA single node assembler for large and complex metagenomics NGS reads, such as soil2017-07-21T15:04:52Z
megan5.11.3bridges.psc.xsede.org2017-07-21T15:04:52Z
meraculous2.2.4bridges.psc.xsede.orgA whole genome assembler for NGS data geared for large genomes.2017-07-21T15:04:52Z
metaphlan1.7.7bridges.psc.xsede.orgMETAgenomic PHyLogenetic ANalysis for taxonomic classification of metagenomic data2017-07-21T15:04:52Z
metaphlan22.6.0bridges.psc.xsede.orgMETAgenomic PHyLogenetic ANalysis for taxonomic classification of metagenomic data2017-07-21T15:04:52Z
metavelvet1.2.10-velvet-maxk245bridges.psc.xsede.orgMetaVelvet; An extension of the Velvet assembler for the de novo metagenome assembly of short sequence reads.2017-07-21T15:04:52Z
metavelvet1.2.10-velvet-maxk95bridges.psc.xsede.orgMetaVelvet; An extension of the Velvet assembler for the de novo metagenome assembly of short sequence reads.2017-07-21T15:04:52Z
metis5.0.2stampede.tacc.xsede.orgSerial graph partitioning and fill-reduction matrix ordering routines2017-07-21T14:29:15Z
metis5.1.0_gnubridges.psc.xsede.org2017-07-21T15:04:52Z
miRDeep20.0.7comet.sdsc.xsede.org2017-07-21T15:01:01Z
migrate3.6.11comet.sdsc.xsede.orgloading intel and mvapich2_ib modules loading the mvapich2_ib module loading intel and mvapich2_ib modules2017-07-21T15:01:01Z
migrate3.6.8comet.sdsc.xsede.orgloading intel and mvapich2_ib modules loading the mvapich2_ib module loading intel and mvapich2_ib modules2017-07-21T15:01:01Z
minced0.2.0bridges.psc.xsede.orgMinCED is a program to find Clustered Regularly Interspaced Short Palindromic Repeats (CRISPRs) in full genomes or environmental datasets such as metagenomes2017-07-21T15:04:52Z
minimac20121116stampede.tacc.xsede.orgLow-memory Markov Chain-based haplotyper2017-07-21T14:29:15Z
mira4.0.2bridges.psc.xsede.orgMIRA - Sequence assembler and sequence mapping for whole genome shotgun and EST / RNASeq sequencing data. Can use Sanger, 454, Illumina and IonTorrent data. PacBio: CCS and error corrected data usable.2017-07-21T15:04:52Z
miso0.5.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
mkl11.1.2.144comet.sdsc.xsede.org2017-07-21T15:01:01Z
mkl11.2.2.164comet.sdsc.xsede.org2017-07-21T15:01:01Z
module-gitnonecomet.sdsc.xsede.org This module will set up an alias for easy anonymous check-out of this version of the environment modules package. \get-modules - retrieve modules sources for this version Version $version2017-07-21T15:01:01Z
module-infononecomet.sdsc.xsede.org This module returns all the various module-info values in whatever mode you use (except in `whatis' mode) Version $version2017-07-21T15:01:01Z
modulesnonecomet.sdsc.xsede.org modules - loads the modules software & application environment This adds $prefix/* to several of the environment variables. Version $version2017-07-21T15:01:01Z
molden5.0.7comet.sdsc.xsede.org2017-07-21T15:01:01Z
mono3.12.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
mopac2016comet.sdsc.xsede.org2017-07-21T15:01:01Z
mothur1.38.1bridges.psc.xsede.orgSoftware for describing and comparing microbial communities2017-07-21T15:04:52Z
mpc1.0.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
mpfr3.1.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
mpi#pgi_openmpi#bridges.psc.xsede.org2017-07-21T15:04:52Z
mpigcc_mvapichbridges.psc.xsede.org2017-07-21T15:04:52Z
mpigcc_openmpibridges.psc.xsede.org2017-07-21T15:04:52Z
mpiintel_mpibridges.psc.xsede.org2017-07-21T15:04:52Z
mpiintel_mvapichbridges.psc.xsede.org2017-07-21T15:04:52Z
mpiintel_openmpibridges.psc.xsede.org2017-07-21T15:04:52Z
mpipgi_mvapichbridges.psc.xsede.org2017-07-21T15:04:52Z
mpipgi_openmpibridges.psc.xsede.org2017-07-21T15:04:52Z
mpi-caffegit_bf17d5a4bridges.psc.xsede.org2017-07-21T15:04:52Z
mpi4py1.3.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
mpiblast1.6.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
mpip3.4.1stampede.tacc.xsede.orgLightweight, Scalable MPI Profiling2017-07-21T14:29:15Z
mrbayes3.2.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
mrbayes3.2.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
mrjob0.5.9bridges.psc.xsede.orgA python mapreduce framework.2017-07-21T15:04:52Z
mrjobdefaultbridges.psc.xsede.orgA python mapreduce framework.2017-07-21T15:04:52Z
mummer3.23bridges.psc.xsede.org2017-07-21T15:04:52Z
mummer3.23stampede.tacc.xsede.orgMUMmer - A modular system for the rapid whole genome alignment of finished or draft sequence2017-07-21T14:29:15Z
mumps4.10stampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
mumps4.10-complexstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
mumps4.10-complexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
mumps4.10-cxxstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
mumps4.10-cxxcomplexstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
mumps4.10-cxxcomplexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
mumps4.10-cxxdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
mumps4.10-debugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
mumps4.10.0stampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
mumps4.10.0-complexstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
mumps4.10.0-complexdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
mumps4.10.0-cxxstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
mumps4.10.0-cxxcomplexstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
mumps4.10.0-cxxcomplexdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
mumps4.10.0-cxxdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
mumps4.10.0-debugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
mumps5.0.1-p1_gnu_openmpibridges.psc.xsede.org2017-07-21T15:04:52Z
muscle3.8.31stampede.tacc.xsede.orgPopular multiple alignment software2017-07-21T14:29:15Z
muscle3.8.31supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
mvapich22.0bmaverick.tacc.xsede.orgMPI-2 implementation for Infiniband2017-07-21T14:28:46Z
mvapich22.1stampede.tacc.xsede.orgMPI-2 implementation for Infiniband2017-07-21T14:29:15Z
mvapich22.1wrangler.tacc.xsede.orgMPI-2 implementation for Infiniband2017-07-21T14:46:27Z
mvapich2_cce2.0.1_cray83xstream.stanford.xsede.org2017-07-21T14:56:54Z
mvapich2_gdr2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
mvapich2_gdr2.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
mvapich2_gnu2.0.1_gnu48xstream.stanford.xsede.org2017-07-21T14:56:54Z
mvapich2_ib2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
mxml2.9comet.sdsc.xsede.org2017-07-21T15:01:01Z
mycc2015-12-03bridges.psc.xsede.orgAutomated binning tool for metagenome sequence classification2017-07-21T15:04:52Z
namd2.10comet.sdsc.xsede.org2017-07-21T15:01:01Z
namd2.10stampede.tacc.xsede.orgScalable Molecular Dynamics software2017-07-21T14:29:15Z
namd2.10-mic_mpistampede.tacc.xsede.orgScalable Molecular Dynamics software2017-07-21T14:29:15Z
namd2.11stampede.tacc.xsede.orgScalable Molecular Dynamics software2017-07-21T14:29:15Z
namd2.11-gpu_smpstampede.tacc.xsede.orgScalable Molecular Dynamics software2017-07-21T14:29:15Z
namd2.12stampede2.tacc.xsede.org2017-07-21T14:56:49Z
namd2.9comet.sdsc.xsede.org2017-07-21T15:01:01Z
namdnamd_cpubridges.psc.xsede.org2017-07-21T15:04:52Z
namdnamd_gpubridges.psc.xsede.org2017-07-21T15:04:53Z
ncl_ncarg6.2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
ncl_ncarg6.2.1stampede.tacc.xsede.orgA library of graphics utilites from the Natl. Center for Atmospheric Research.2017-07-21T14:29:15Z
ncl_ncarg6.3.0maverick.tacc.xsede.orgA library of graphics utilites from the Natl. Center for Atmospheric Research.2017-07-21T14:28:46Z
ncl_ncarg6.3.0stampede2.tacc.xsede.orgA library of graphics utilites from the Natl. Center for Atmospheric Research.2017-07-21T14:56:49Z
ncl_ncarg6.4.0bridges.psc.xsede.org2017-07-21T15:04:53Z
nco4.5.2stampede.tacc.xsede.orgPrograms for manipulating and analyzing NetCDF files2017-07-21T14:29:15Z
nco4.5.4maverick.tacc.xsede.orgPrograms for manipulating and analyzing NetCDF files2017-07-21T14:28:46Z
nco4.6.3stampede2.tacc.xsede.orgPrograms for manipulating and analyzing NetCDF files2017-07-21T14:56:49Z
ncurses5.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
ncview2.1.5stampede.tacc.xsede.orgVisualization program for NetCDF files2017-07-21T14:29:15Z
ncview2.1.7comet.sdsc.xsede.org2017-07-21T15:01:01Z
netCDF4.3.3.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
netCDF-Fortran4.4.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
netcdf3.6.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
netcdf3.6.2-gccbridges.psc.xsede.org2017-07-21T15:04:53Z
netcdf3.6.2-iccbridges.psc.xsede.org2017-07-21T15:04:53Z
netcdf4.2.1.1maverick.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets.2017-07-21T14:28:46Z
netcdf4.3.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
netcdf4.3.2wrangler.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets (Serial Version).2017-07-21T14:46:27Z
netcdf4.3.3.1stampede.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets (Serial Version).2017-07-21T14:29:15Z
netcdf4.3.3.1stampede2.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets (Serial Version).2017-07-21T14:56:49Z
netcdf4.4.1.1-gccbridges.psc.xsede.org2017-07-21T15:04:53Z
netcdf4.4.1.1-iccbridges.psc.xsede.org2017-07-21T15:04:53Z
netcdf4.4.4-fortran-gccbridges.psc.xsede.org2017-07-21T15:04:53Z
netcdf4.4.4-fortran-iccbridges.psc.xsede.org2017-07-21T15:04:53Z
networkx1.11-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
neuron7.4bridges.psc.xsede.org2017-07-21T15:04:53Z
newbler2.6stampede.tacc.xsede.orgNewbler is a software package for de novo DNA sequence assembly. It is designed specifically for assembling sequence data generated by the 454 GS-series of pyrosequencing platforms sold by 454 Life Sciences, a Roche Diagnostics company.2017-07-21T14:29:15Z
ngscheckmate2016.10.12bridges.psc.xsede.orgMEGAN alignment tool, is a blast-like sequence alignment and analysis tool designed for processing high-throughput sequencing data, especially in the context of metagenomics.2017-07-21T15:04:53Z
ninja1.2.2stampede.tacc.xsede.orgNinja - a software for large-scale neighbor-joining phylogeny inference2017-07-21T14:29:15Z
node0.12.6comet.sdsc.xsede.org2017-07-21T15:01:01Z
novoalign3.02.02stampede.tacc.xsede.orgnovoalign - Aligner for short nucleotide space reads.2017-07-21T14:29:15Z
nullnonecomet.sdsc.xsede.org This module does absolutely nothing. It's meant simply as a place holder in your dot file initialization. Version $version2017-07-21T15:01:01Z
numactl2.0.10xstream.stanford.xsede.org2017-07-21T14:56:54Z
numpy1.10.4-Python-2.7.10xstream.stanford.xsede.org2017-07-21T14:56:54Z
numpy1.10.4-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
nwchem6.5stampede.tacc.xsede.orgGeneral computational chemistry package (quantum chemistry and molecular dynamics)2017-07-21T14:29:15Z
nwchem6.6bridges.psc.xsede.org2017-07-21T15:04:53Z
nwchem6.6comet.sdsc.xsede.org2017-07-21T15:01:01Z
nwchem6.6stampede.tacc.xsede.orgGeneral computational chemistry package (quantum chemistry and molecular dynamics)2017-07-21T14:29:15Z
nwchem6.6stampede2.tacc.xsede.orgNWChem aims to provide its users with computational chemistry tools that are scalable both in their ability to treat large scientific computational chemistry problems efficiently, and in their use of available parallel computing resources from high-performance parallel supercomputers to conventional workstation clusters.2017-07-21T14:56:49Z
oases0.2.08stampede.tacc.xsede.orgDe novo transcriptome assembler for very short reads2017-07-21T14:29:16Z
octave3.6.1stampede.tacc.xsede.orgis a high-level language, primarily intended for numerical computations.2017-07-21T14:29:16Z
octave4.2.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
opari21.0.7stampede.tacc.xsede.orgOMP instrumenter2017-07-21T14:29:15Z
openacc2016xstream.stanford.xsede.orgOpenACC Toolkit 20162017-07-21T14:56:54Z
openbabel2.3.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
openbabel2.3.2stampede.tacc.xsede.orgopenbabal - chemical toolbox designed to speak the many languages of chemical data2017-07-21T14:29:15Z
openblas0.2.19bridges.psc.xsede.org2017-07-21T15:04:53Z
opencv2.4.13.2bridges.psc.xsede.org2017-07-21T15:04:53Z
opencv2.4.6.1stampede.tacc.xsede.organ imaging library2017-07-21T14:29:15Z
opencv2.4.6.1wrangler.tacc.xsede.organ imaging library2017-07-21T14:46:27Z
opencv3.2.0bridges.psc.xsede.org2017-07-21T15:04:53Z
opencvopencvbridges.psc.xsede.org2017-07-21T15:04:53Z
openfoam2.3.0bridges.psc.xsede.org2017-07-21T15:04:53Z
openfoam2.4.0stampede.tacc.xsede.orgOpenFOAM 2.4.02017-07-21T14:29:15Z
openfoam4.1stampede2.tacc.xsede.orgOpenFOAM 4.12017-07-21T14:56:49Z
openkim1.1.1stampede.tacc.xsede.orgKnowledgebase of Interatomic Models2017-07-21T14:29:15Z
openkim1.2.2stampede.tacc.xsede.orgKnowledgebase of Interatomic Models2017-07-21T14:29:15Z
openmpi_ib1.8.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
openslide3.4.1bridges.psc.xsede.orgA library that provides an interface to read whole-slide images.2017-07-21T15:04:53Z
ospray1.2.1stampede2.tacc.xsede.org2017-07-21T14:56:49Z
p3dfft2.7.1stampede.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2017-07-21T14:29:15Z
p3dfft2.7.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
p3dfft2.7.5stampede2.tacc.xsede.orgNumerical library, contains discrete Fourier transformation2017-07-21T14:56:49Z
p4est1.1stampede.tacc.xsede.orgoctree support for dealii2017-07-21T14:29:15Z
p4est2.0stampede2.tacc.xsede.orgoctree support for dealii2017-07-21T14:56:49Z
pacman3.29maverick.tacc.xsede.orgTeraGrid Pacman utility2017-07-21T14:28:46Z
pacman3.29stampede.tacc.xsede.orgTeraGrid Pacman utility2017-07-21T14:29:15Z
pacman3.29wrangler.tacc.xsede.orgTeraGrid Pacman utility2017-07-21T14:46:27Z
pacman3.29-r3supermic.cct-lsu.xsede.orgTeraGrid Pacman utility2017-07-21T14:40:38Z
paml4.9abridges.psc.xsede.org2017-07-21T15:04:53Z
pandoc1.17.2bridges.psc.xsede.org2017-07-21T15:04:53Z
papi4.4.0stampede.tacc.xsede.orgInterface to monitor performance counter hardware for quantifying application behavior2017-07-21T14:29:16Z
papi5.3.0stampede.tacc.xsede.orgInterface to monitor performance counter hardware for quantifying application behavior2017-07-21T14:29:16Z
papi5.4.0.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
papi5.4.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
papi5.4.3bridges.psc.xsede.org2017-07-21T15:04:53Z
papi5.5.1stampede2.tacc.xsede.orgInterface to monitor performance counter hardware for quantifying application behavior2017-07-21T14:56:49Z
parallel-netcdf4.3.2wrangler.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets (Parallel Version).2017-07-21T14:46:27Z
parallel-netcdf4.3.3.1stampede.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets (Parallel Version).2017-07-21T14:29:15Z
parallel-netcdf4.3.3.1stampede2.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets (Parallel Version).2017-07-21T14:56:49Z
parallel_studio_xe2017.4.056bridges.psc.xsede.org2017-07-21T15:04:53Z
paraview4.3.1maverick.tacc.xsede.orga parallel interactive visualization system2017-07-21T14:28:46Z
paraview4.3.1stampede.tacc.xsede.orga parallel interactive visualization system2017-07-21T14:29:15Z
paraview5.2.0stampede.tacc.xsede.orga parallel interactive visualization system2017-07-21T14:29:15Z
paraview5.4stampede2.tacc.xsede.org2017-07-21T14:56:49Z
parmetis4.0.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
parmetis4.0.3_gnu_openmpibridges.psc.xsede.org2017-07-21T15:04:53Z
parmetis_petsc4.0stampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
parmetis_petsc4.0-complexstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
parmetis_petsc4.0-complexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
parmetis_petsc4.0-cxxstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
parmetis_petsc4.0-cxxcomplexstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
parmetis_petsc4.0-cxxcomplexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
parmetis_petsc4.0-cxxdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
parmetis_petsc4.0-debugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
parseltongue2.1bridges.psc.xsede.org2017-07-21T15:04:53Z
pbjelly15.8.24bridges.psc.xsede.org2017-07-21T15:04:53Z
pdt3.20comet.sdsc.xsede.org2017-07-21T15:01:01Z
pedcheck1.00stampede.tacc.xsede.orgpedcheck - Program for detecting marker typing incompatibilities in pedigree data2017-07-21T14:29:15Z
perfexpert4.1.1stampede.tacc.xsede.orgAn Easy-to-Use Automatic Performance Diagnosis and Optimization Tool for HPC Applications2017-07-21T14:29:15Z
perftools6.2.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
perftools-lite6.2.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
perl5.16.2stampede.tacc.xsede.orgPerl2017-07-21T14:29:15Z
perl5.18.4-threadsbridges.psc.xsede.org2017-07-21T15:04:53Z
perl5.22.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
perl5.24.0-threadsbridges.psc.xsede.org2017-07-21T15:04:53Z
petsc3.5maverick.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:28:46Z
petsc3.5stampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.5wrangler.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:46:27Z
petsc3.5-complexmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:28:46Z
petsc3.5-complexstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.5-complexwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:46:27Z
petsc3.5-complexdebugmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:28:46Z
petsc3.5-complexdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.5-complexdebugwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:46:27Z
petsc3.5-cxxmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:28:46Z
petsc3.5-cxxstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.5-cxxwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:46:27Z
petsc3.5-cxxcomplexmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:28:46Z
petsc3.5-cxxcomplexstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.5-cxxcomplexwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:46:27Z
petsc3.5-cxxcomplexdebugmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:28:46Z
petsc3.5-cxxcomplexdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.5-cxxcomplexdebugwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:46:27Z
petsc3.5-cxxdebugmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:28:46Z
petsc3.5-cxxdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.5-cxxdebugwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:46:27Z
petsc3.5-debugmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:28:46Z
petsc3.5-debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.5-debugwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:46:27Z
petsc3.5-singlestampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.5-singlewrangler.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:46:27Z
petsc3.5-unimaverick.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:28:46Z
petsc3.5-unistampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.5-uniwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:46:27Z
petsc3.5-unidebugmaverick.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:28:46Z
petsc3.5-unidebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.5-unidebugwrangler.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:46:27Z
petsc3.6stampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-complexstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-complexdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-cxxstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-cxxcomplexstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-cxxcomplexdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-cxxdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-cxxi64stampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-cxxi64debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-i64stampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-i64debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-singlestampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-unistampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6-unidebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.6.1bridges.psc.xsede.org2017-07-21T15:04:53Z
petsc3.6.1-intelbridges.psc.xsede.org2017-07-21T15:04:53Z
petsc3.6.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
petsc3.7stampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7stampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-complexstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-complexstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-complexdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-complexdebugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-cxxstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-cxxstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-cxxcomplexstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-cxxcomplexstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-cxxcomplexdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-cxxcomplexdebugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-cxxdebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-cxxdebugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-cxxi64stampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-cxxi64stampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-cxxi64debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-cxxi64debugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-debugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-i64stampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-i64stampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-i64debugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-i64debugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-singlestampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-singlestampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-unistampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-unistampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7-unidebugstampede.tacc.xsede.orgNumerical library for sparse linear algebra2017-07-21T14:29:15Z
petsc3.7-unidebugstampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
petsc3.7.4_gnu_openmpibridges.psc.xsede.org2017-07-21T15:04:53Z
pflotrandev20150522stampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
pgi14.10supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
pgi14.3supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
pgi15.10supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
pgi15.4supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
pgi16.10bridges.psc.xsede.org2017-07-21T15:04:53Z
pgi16.3bridges.psc.xsede.org2017-07-21T15:04:53Z
pgi16.5supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
pgi17.5bridges.psc.xsede.org2017-07-21T15:04:53Z
pgi17.5comet.sdsc.xsede.orgUnloading compiler-dependent module $app2017-07-21T15:01:01Z
phdf51.8.14wrangler.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Parallel Version).2017-07-21T14:46:27Z
phdf51.8.16stampede.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Parallel Version).2017-07-21T14:29:15Z
phdf51.8.16stampede2.tacc.xsede.orgGeneral purpose library and file format for storing scientific data (Parallel Version).2017-07-21T14:56:49Z
phdf51.8.16_gnu_openmpibridges.psc.xsede.org2017-07-21T15:04:53Z
phdf51.8.16_intelbridges.psc.xsede.org2017-07-21T15:04:53Z
phylosift1.0.1bridges.psc.xsede.org2017-07-21T15:04:53Z
phyutility2.2.6stampede.tacc.xsede.orgphyutility - Program to manipulate phylogenetic trees2017-07-21T14:29:16Z
picard1.83stampede.tacc.xsede.orgPicard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported.2017-07-21T14:29:15Z
picard1.92stampede.tacc.xsede.orgPicard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported.2017-07-21T14:29:15Z
picard1.98stampede.tacc.xsede.orgPicard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported.2017-07-21T14:29:15Z
picard2.1.1bridges.psc.xsede.org2017-07-21T15:04:53Z
picard2.3.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
pigz2.3.4supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
pilon1.16bridges.psc.xsede.org2017-07-21T15:04:53Z
pixman0.32.6xstream.stanford.xsede.org2017-07-21T14:56:54Z
pkg-config0.27.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
pkg-config0.29xstream.stanford.xsede.org2017-07-21T14:56:54Z
platanus1.2.4bridges.psc.xsede.orgPlatanus is a de novo sequence assembler for NGS data.2017-07-21T15:04:53Z
plink1.07stampede.tacc.xsede.orgplink - Whole genome association analysis toolset2017-07-21T14:29:15Z
plink1.9comet.sdsc.xsede.org2017-07-21T15:01:01Z
plinkseq0.10bridges.psc.xsede.orgPLINK/SEQ is an open-source C/C++ library for working with human genetic variation data2017-07-21T15:04:53Z
pmetis4.0.2stampede.tacc.xsede.orgParallel graph partitioning and fill-reduction matrix ordering routines2017-07-21T14:29:15Z
pnetcdf1.6.1stampede.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets(PnetCDF).2017-07-21T14:29:15Z
pnetcdf1.8.1stampede2.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets(PnetCDF).2017-07-21T14:56:49Z
png1.6.21bridges.psc.xsede.org2017-07-21T15:04:53Z
polymake2.14comet.sdsc.xsede.org2017-07-21T15:01:01Z
povray3.7.0.RC7stampede.tacc.xsede.orgPersistence of Vision Raytracer2017-07-21T14:29:15Z
pplacer1.1alpha17bridges.psc.xsede.orgSuite of programs for analyzing phylogenetic trees2017-07-21T15:04:53Z
primer31.1.4bridges.psc.xsede.org2017-07-21T15:04:53Z
primer32.2.3bridges.psc.xsede.org2017-07-21T15:04:53Z
primer32.3.7bridges.psc.xsede.org2017-07-21T15:04:53Z
prodigal2.6.2bridges.psc.xsede.orgProdigal is a program for protein-coding gene prediction for prokaryotic genomes.2017-07-21T15:04:53Z
prodigal2.6.3bridges.psc.xsede.orgProdigal is a program for protein-coding gene prediction for prokaryotic genomes.2017-07-21T15:04:53Z
proj4.9.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
prokka1.11bridges.psc.xsede.orgA software tool for the rapid annotation of prokaryotic genomes.2017-07-21T15:04:53Z
protobuf2.4.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
protobuf2.5.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
protobuf2.6.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
protobuf3.0.2xstream.stanford.xsede.org2017-07-21T14:56:54Z
protobuf3.2.0bridges.psc.xsede.org2017-07-21T15:04:53Z
protobuf-python3.0.2-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
psi41.0.0bridges.psc.xsede.org2017-07-21T15:04:53Z
pylauncher2.0stampede.tacc.xsede.orgflexible parametric job launcher2017-07-21T14:29:16Z
pylauncher2.1maverick.tacc.xsede.orgflexible parametric job launcher2017-07-21T14:28:46Z
pylauncher2.1stampede.tacc.xsede.orgflexible parametric job launcher2017-07-21T14:29:16Z
pylauncher2.1wrangler.tacc.xsede.orgflexible parametric job launcher2017-07-21T14:46:27Z
pyrosetta2013wk43stampede.tacc.xsede.orgThe premier software suite for macromolecular modeling2017-07-21T14:29:16Z
pyrosetta3.6stampede.tacc.xsede.orgThe premier software suite for macromolecular modeling2017-07-21T14:29:16Z
pysam0.8.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
pysqlite2.6.3-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
python2.7.10comet.sdsc.xsede.org2017-07-21T15:01:01Z
python2.7.10-mkl-micsupermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
python2.7.11_gccbridges.psc.xsede.orgThis version of python provides python 2.7.11, including numpy, scipy, matplotlib, nose and cutadapt.2017-07-21T15:04:53Z
python2.7.11_gcc_np1.11bridges.psc.xsede.org2017-07-21T15:04:53Z
python2.7.12stampede.tacc.xsede.orgscientific scripting package2017-07-21T14:29:15Z
python2.7.12stampede.tacc.xsede.orgscientific scripting package2017-07-21T14:29:15Z
python2.7.13stampede2.tacc.xsede.org2017-07-21T14:56:49Z
python2.7.13stampede2.tacc.xsede.orgscientific scripting package2017-07-21T14:56:49Z
python2.7.13wrangler.tacc.xsede.orgscientific scripting package2017-07-21T14:46:27Z
python2.7.13wrangler.tacc.xsede.org2017-07-21T14:46:27Z
python2.7.13-anaconda-tensorflowsupermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
python2.7.3-epd-7.3.2stampede.tacc.xsede.orginterpreted programming language2017-07-21T14:29:15Z
python2.7.6maverick.tacc.xsede.orgscientific scripting package2017-07-21T14:28:46Z
python2.7.7-anacondasupermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
python2.7.9wrangler.tacc.xsede.orgscientific scripting package2017-07-21T14:46:27Z
python2.7.9wrangler.tacc.xsede.orgscientific scripting package2017-07-21T14:46:27Z
python3.4.2bridges.psc.xsede.org2017-07-21T15:04:53Z
pythonintel_2.7.12bridges.psc.xsede.org2017-07-21T15:04:53Z
python22.7.11_gccbridges.psc.xsede.org2017-07-21T15:04:53Z
python22.7.11_gcc_np1.11bridges.psc.xsede.org2017-07-21T15:04:53Z
python2intel_2.7.12bridges.psc.xsede.org2017-07-21T15:04:53Z
python33.4.2bridges.psc.xsede.org2017-07-21T15:04:53Z
python33.5.2_gcc_mklbridges.psc.xsede.org2017-07-21T15:04:53Z
python33.6.1stampede2.tacc.xsede.org2017-07-21T14:56:49Z
python33.6.1stampede2.tacc.xsede.orgscientific scripting package2017-07-21T14:56:49Z
python3intel_3.5.2bridges.psc.xsede.org2017-07-21T15:04:53Z
pytorch0.1.5bridges.psc.xsede.org2017-07-21T15:04:53Z
qchem4.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
qe5.3.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
qe6.0stampede.tacc.xsede.orgintegrated suite of computer codes for electronic structure calculations and material modeling at the nanoscale.2017-07-21T14:29:15Z
qe6.1stampede2.tacc.xsede.orgIntegrated suite of computer codes for electronic structure calculations and material modeling at the nanoscale.2017-07-21T14:56:49Z
qiime1.9.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
qorts44ab10dbridges.psc.xsede.orgThe QoRTs software package is a fast, efficient, and portable multifunction toolkit designed to assist in the analysis, quality control, and data management of RNA-Seq datasets.2017-07-21T15:04:53Z
qt4.8.4maverick.tacc.xsede.orga visual widget library for UI construction2017-07-21T14:28:46Z
qt4.8.4stampede.tacc.xsede.orga visual widget library for UI construction2017-07-21T14:29:16Z
qt5.5.1stampede.tacc.xsede.orga visual widget library for UI construction2017-07-21T14:29:16Z
qt55.9.0stampede2.tacc.xsede.org2017-07-21T14:56:49Z
randfold2.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
randrproto1.5.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
rapidminer7.1.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
raxml8.1.24comet.sdsc.xsede.org2017-07-21T15:01:01Z
raxml8.2.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
raxml8.2.9bridges.psc.xsede.org2017-07-21T15:04:53Z
ray2.3.1bridges.psc.xsede.org2017-07-21T15:04:53Z
relion1.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
remora1.0.0stampede.tacc.xsede.org2017-07-21T14:29:15Z
remora1.5stampede.tacc.xsede.orgREsource MOnitoring for Remote Applications2017-07-21T14:29:15Z
remora1.7maverick.tacc.xsede.orgREsource MOnitoring for Remote Applications2017-07-21T14:28:46Z
remora1.7stampede.tacc.xsede.orgREsource MOnitoring for Remote Applications2017-07-21T14:29:15Z
remora1.8supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
remora1.8.1stampede2.tacc.xsede.orgREsource MOnitoring for Remote Applications2017-07-21T14:56:49Z
remora1.8.1stampede2.tacc.xsede.orgREsource MOnitoring for Remote Applications2017-07-21T14:56:49Z
renderproto0.11xstream.stanford.xsede.org2017-07-21T14:56:54Z
repeatmasker4.0.6bridges.psc.xsede.orgRepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences2017-07-21T15:04:53Z
requests2.7.0-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
rnammer1.2bridges.psc.xsede.org2017-07-21T15:04:53Z
rnnotator3.4.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
root5.34.14stampede.tacc.xsede.orgRoot -- a set of OO frameworks with all the functionality needed to handle and analyze large amounts of data in a very efficient way2017-07-21T14:29:15Z
rosetta3.5stampede.tacc.xsede.orgThe premier software suite for macromolecular modeling2017-07-21T14:29:15Z
rosetta3.7bridges.psc.xsede.org2017-07-21T15:04:53Z
rosetta3.7stampede.tacc.xsede.orgThe premier software suite for macromolecular modeling2017-07-21T14:29:15Z
rsem1.2.21bridges.psc.xsede.org2017-07-21T15:04:53Z
rseqc2.6.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
rum2.0.5stampede.tacc.xsede.orgRUM - RNAseq Unified Mapper2017-07-21T14:29:15Z
rum2.0.5supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
sabre1.00stampede.tacc.xsede.orgbarcode demultiplexing and trimming tool for FastQ files2017-07-21T14:29:15Z
sailfish0.9.2bridges.psc.xsede.org2017-07-21T15:04:53Z
salmon0.6.0bridges.psc.xsede.org2017-07-21T15:04:54Z
salmon0.7.2bridges.psc.xsede.org2017-07-21T15:04:54Z
salmon0.8.1bridges.psc.xsede.org2017-07-21T15:04:54Z
samtools0.1.19bridges.psc.xsede.org2017-07-21T15:04:54Z
samtools0.1.19stampede.tacc.xsede.orgSAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format.2017-07-21T14:29:15Z
samtools1.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
samtools1.2stampede.tacc.xsede.orgSAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format.2017-07-21T14:29:15Z
samtools1.3bridges.psc.xsede.org2017-07-21T15:04:54Z
samtools1.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
samtools1.3stampede.tacc.xsede.orgSamtools is a suite of programs for interacting with high-throughput sequencing data.2017-07-21T14:29:15Z
samtools1.3wrangler.tacc.xsede.orgSamtools is a suite of programs for interacting with high-throughput sequencing data.2017-07-21T14:46:27Z
samtools1.3.1bridges.psc.xsede.org2017-07-21T15:04:54Z
sanitytool1.1stampede.tacc.xsede.org2017-07-21T14:29:16Z
sanitytool1.3maverick.tacc.xsede.org2017-07-21T14:28:46Z
sanitytool1.3stampede.tacc.xsede.org2017-07-21T14:29:16Z
sanitytool1.4stampede2.tacc.xsede.org2017-07-21T14:56:49Z
scalapack2.0.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
scikitlearn_0.17.1_image_0.12.3bridges.psc.xsede.org2017-07-21T15:04:54Z
scikit-image0.12.3-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
scipy0.16.1-Python-2.7.10xstream.stanford.xsede.org2017-07-21T14:56:54Z
scipy0.16.1-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
scipy2.7comet.sdsc.xsede.org2017-07-21T15:01:01Z
scons2.3.0stampede.tacc.xsede.orgSCons is a software construction tool (build tool, or make tool) implemented in Python, that uses Python scripts as *configuration files* for software builds. Based on the design that won the Software Carpentry build tool competition, SCons solves a number of problems associated with other build tools, especially including the classic and ubiquitous Make itself.2017-07-21T14:29:16Z
scotch6.0.0_intelbridges.psc.xsede.org2017-07-21T15:04:54Z
scotch6.0.4_gnu_openmpibridges.psc.xsede.org2017-07-21T15:04:54Z
scripture07092012stampede.tacc.xsede.org2017-07-21T14:29:16Z
scythe0.95stampede.tacc.xsede.orgA very simple 3' adapter trimmer2017-07-21T14:29:15Z
scythe0.981bridges.psc.xsede.org2017-07-21T15:04:54Z
seqtk1.2-r94bridges.psc.xsede.org2017-07-21T15:04:54Z
settarg6.0.15xstream.stanford.xsede.org2017-07-21T14:56:54Z
settarg7.3.26wrangler.tacc.xsede.orgA dynamic environment system based on Lmod2017-07-21T14:46:27Z
settarg7.4.1maverick.tacc.xsede.orgA dynamic environment system based on Lmod2017-07-21T14:28:46Z
settarg7.4.1stampede.tacc.xsede.orgA dynamic environment system based on Lmod2017-07-21T14:29:15Z
settarg7.4.1wrangler.tacc.xsede.orgA dynamic environment system based on Lmod2017-07-21T14:46:27Z
settarg7.4.12stampede2.tacc.xsede.orgA dynamic environment system based on Lmod2017-07-21T14:56:49Z
sickle1.2stampede.tacc.xsede.orgA windowed adaptive trimming tool for FASTQ files using quality2017-07-21T14:29:15Z
sickle1.33bridges.psc.xsede.org2017-07-21T15:04:54Z
siesta3.2stampede.tacc.xsede.orgSpanish Initiative for Electronic Simulations with Thousands of Atoms2017-07-21T14:29:15Z
siesta4.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
siesta4.0stampede2.tacc.xsede.orgSpanish Initiative for Electronic Simulations with Thousands of Atoms2017-07-21T14:56:49Z
signalp4.1cbridges.psc.xsede.org2017-07-21T15:04:54Z
silo4.10stampede.tacc.xsede.orga scalable mesh and field I/O library and scientific database2017-07-21T14:29:15Z
silo4.10.2stampede2.tacc.xsede.orga scalable mesh and field I/O library and scientific database2017-07-21T14:56:49Z
singularity2.1stampede.tacc.xsede.orgSingularity is an open-source software container platform.2017-07-21T14:29:16Z
singularity2.2comet.sdsc.xsede.org Version $singularityversion2017-07-21T15:01:01Z
singularity2.2.1wrangler.tacc.xsede.orgApplication and environment virtualization2017-07-21T14:46:27Z
singularity2.3bridges.psc.xsede.orgSingularity HPC container software2017-07-21T15:04:54Z
singularity2.3.1xstream.stanford.xsede.orgSingularity: Application containers for Linux2017-07-21T14:56:54Z
slepc3.5stampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.5-complexstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.5-complexdebugstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.5-cxxstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.5-cxxcomplexstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.5-cxxcomplexdebugstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.5-cxxdebugstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.5-debugstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6stampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-complexstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-complexdebugstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-cxxstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-cxxcomplexstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-cxxcomplexdebugstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-cxxdebugstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-cxxi64stampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-cxxi64debugstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-debugstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-i64stampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-i64debugstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-singlestampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-unistampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6-unidebugstampede.tacc.xsede.orgLibrary of eigensolvers2017-07-21T14:29:15Z
slepc3.6.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
slepc3.7stampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7stampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-complexstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-complexstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-complexdebugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-complexdebugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-cxxstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-cxxstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-cxxcomplexstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-cxxcomplexstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-cxxcomplexdebugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-cxxcomplexdebugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-cxxdebugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-cxxdebugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-cxxi64stampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-cxxi64stampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-cxxi64debugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-cxxi64debugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-debugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-debugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-i64stampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-i64stampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-i64debugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-i64debugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-singlestampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-singlestampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-unistampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-unistampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
slepc3.7-unidebugstampede.tacc.xsede.orgScalable Library for Eigen Problem Computations2017-07-21T14:29:15Z
slepc3.7-unidebugstampede2.tacc.xsede.orgScalable Library for Eigen Problem Computations, Library of eigensolvers2017-07-21T14:56:49Z
snappy1.1.3xstream.stanford.xsede.org2017-07-21T14:56:54Z
snvmix0.11.8-r5bridges.psc.xsede.org2017-07-21T15:04:54Z
soapdenovo240comet.sdsc.xsede.org2017-07-21T15:01:01Z
soapdenovo22015-10-09bridges.psc.xsede.orgSOAPdenovo2 is a de novo assembler for next generation sequencing reads.2017-07-21T15:04:54Z
soapdenovo2r240stampede.tacc.xsede.orgsoapdenovo2 - novel short-read assembly method that can build a de novo draft assembly for the human-sized genomes2017-07-21T14:29:15Z
soaptrans1.01stampede.tacc.xsede.orgde novo transcriptome assembler basing on the SOAPdenovo2017-07-21T14:29:15Z
somaticsniper1.0.5bridges.psc.xsede.org2017-07-21T15:04:54Z
spades3.10.1bridges.psc.xsede.orgSt. Petersburg genome assembler - An assembly toolkit containing various assembly pipelines2017-07-21T15:04:54Z
spades3.10.1wrangler.tacc.xsede.orgSPAdes – St. Petersburg genome assembler2017-07-21T14:46:27Z
spades3.8.1bridges.psc.xsede.orgSt. Petersburg genome assembler - An assembly toolkit containing various assembly pipelines2017-07-21T15:04:54Z
spades3.9.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
spark2.1.0bridges.psc.xsede.orgA big data processing framework.2017-07-21T15:04:54Z
spider21.01stampede.tacc.xsede.orgspider - an image processing system for electron microscopy2017-07-21T14:29:15Z
spider21.02stampede.tacc.xsede.orgspider - an image processing system for electron microscopy2017-07-21T14:29:15Z
sprng2.0bridges.psc.xsede.org2017-07-21T15:04:54Z
sprng2.0bcomet.sdsc.xsede.org2017-07-21T15:01:01Z
squid1.9gcomet.sdsc.xsede.org2017-07-21T15:01:01Z
sra-toolkit2.8.1-2bridges.psc.xsede.org2017-07-21T15:04:54Z
sratoolkit2.8.1stampede.tacc.xsede.orgThe SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives.2017-07-21T14:29:15Z
sratoolkit2.8.1wrangler.tacc.xsede.orgThe SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives.2017-07-21T14:46:27Z
stacks1.13stampede.tacc.xsede.orgStacks - short-read genomics pipeline2017-07-21T14:29:16Z
stacks1.37comet.sdsc.xsede.org2017-07-21T15:01:01Z
stampy1.0.22stampede.tacc.xsede.orgStampy - Illumina short reads mapper2017-07-21T14:29:16Z
staraligner2.5.2bbridges.psc.xsede.orgSpliced Transcripts Alignment to a Reference2017-07-21T15:04:54Z
strelka1.0.14bridges.psc.xsede.org2017-07-21T15:04:54Z
stringtie1.3.3bridges.psc.xsede.orgTranscript assembly and quantification for RNA-Seq2017-07-21T15:04:54Z
sundials2.5.0stampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
sundials2.5.0-complexstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
sundials2.5.0-complexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
sundials2.5.0-cxxstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
sundials2.5.0-cxxcomplexstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
sundials2.5.0-cxxcomplexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
sundials2.5.0-cxxdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
sundials2.5.0-debugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
sundials2.6.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
super-deduper7c48db4bridges.psc.xsede.orgA tool for removing PCR duplicates from sequencing data.2017-07-21T15:04:54Z
superlu3.3stampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
superlu3.3-complexstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
superlu3.3-complexdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
superlu3.3-cxxstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
superlu3.3-cxxcomplexstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
superlu3.3-cxxcomplexdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
superlu3.3-cxxdebugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
superlu3.3-debugstampede.tacc.xsede.orgNumerical library for sparse direct solvers2017-07-21T14:29:15Z
superlu4.2comet.sdsc.xsede.org2017-07-21T15:01:01Z
superlu5.2.1stampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
superlu5.2.1-complexstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
superlu5.2.1-complexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
superlu5.2.1-cxxstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
superlu5.2.1-cxxcomplexstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
superlu5.2.1-cxxcomplexdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
superlu5.2.1-cxxdebugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
superlu5.2.1-debugstampede2.tacc.xsede.orgNumerical library for sparse solvers2017-07-21T14:56:49Z
superlu_dist5.1.2_gnu_openmpibridges.psc.xsede.org2017-07-21T15:04:54Z
swift0.96.2supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
swig3.0.12stampede.tacc.xsede.orgSWIG is a software development tool that connects programs written in C and C++ with a variety of high-level programming languages.2017-07-21T14:29:16Z
swig3.0.12stampede2.tacc.xsede.orgSWIG is a software development tool that connects programs written in C and C++ with a variety of high-level programming languages.2017-07-21T14:56:49Z
swig3.0.5stampede.tacc.xsede.orgSWIG is a software development tool that connects programs written in C and C++ with a variety of high-level programming languages.2017-07-21T14:29:16Z
swig3.0.8bridges.psc.xsede.org2017-07-21T15:04:54Z
swr12.1stampede.tacc.xsede.org2017-07-21T14:29:16Z
swr13.0stampede.tacc.xsede.org2017-07-21T14:29:16Z
swr17.0maverick.tacc.xsede.org2017-07-21T14:28:46Z
swr17.0stampede.tacc.xsede.org2017-07-21T14:29:16Z
swr17.0wrangler.tacc.xsede.org2017-07-21T14:46:27Z
swr17.0.6stampede2.tacc.xsede.org2017-07-21T14:56:49Z
szip2.1bridges.psc.xsede.org2017-07-21T15:04:54Z
t3pio2.4stampede.tacc.xsede.orgParallel I/O tool2017-07-21T14:29:15Z
tabix0.2.6stampede.tacc.xsede.orgIndexes a tab-delimited genome position file in.tab.bgz and creates an index file.2017-07-21T14:29:15Z
tacc-singularity2.3.1stampede2.tacc.xsede.orgApplication and environment virtualization2017-07-21T14:56:49Z
tacc_tips0.5maverick.tacc.xsede.orgTips generated at each login.2017-07-21T14:28:46Z
tacc_tips0.5stampede.tacc.xsede.orgTips generated at each login.2017-07-21T14:29:15Z
tacc_tips0.5stampede2.tacc.xsede.orgTips generated at each login.2017-07-21T14:56:49Z
tau2.23comet.sdsc.xsede.org2017-07-21T15:01:01Z
tau2.24.1stampede.tacc.xsede.orgFramework for Application profiling and optimization2017-07-21T14:29:15Z
tau2.26.2p1stampede2.tacc.xsede.orgFramework for Application profiling and optimization2017-07-21T14:56:49Z
tau2.26.2p1_intelbridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow0.10xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/7.5.18 cuDNN/5.1)2017-07-21T14:56:54Z
tensorflow0.10.0bridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow0.10.0_nogpubridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow0.11xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/7.5.18 cuDNN/5.1)2017-07-21T14:56:54Z
tensorflow0.11.0bridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow0.11.0_nogpubridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow0.12.1bridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow0.12.1_nogpubridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow0.7.1bridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow0.7.1xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/7.5.18 cuDNN/4.0)2017-07-21T14:56:54Z
tensorflow0.7.1_nogpubridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow0.8xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/7.5.18 cuDNN/4.0)2017-07-21T14:56:54Z
tensorflow0.8.0bridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow0.8.0_nogpubridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow0.9xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/7.5.18 cuDNN/4.0)2017-07-21T14:56:54Z
tensorflow0.9.0bridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow0.9.0_nogpubridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow1.0.0xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/8.0.44 cuDNN/5.1 Python/2.7.9)2017-07-21T14:56:54Z
tensorflow1.0.0-cp36xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 Python/3.6.0 CUDA/8.0.44 cuDNN/5.1-CUDA-8.0.44)2017-07-21T14:56:54Z
tensorflow1.0.1bridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow1.0.1_anacondabridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow1.0.1_anaconda_nogpubridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow1.0.1_nogpubridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow1.1.0bridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflow1.1.0xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/8.0.44 cuDNN/5.1 Python/2.7.9)2017-07-21T14:56:54Z
tensorflow1.1.0-cp36xstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 Python/3.6.0 CUDA/8.0.44 cuDNN/5.1-CUDA-8.0.44)2017-07-21T14:56:54Z
tensorflow1.1.0_nogpubridges.psc.xsede.org2017-07-21T15:04:54Z
tensorflowdefaultxstream.stanford.xsede.orgGoogle TensorFlow is an Open Source Software Library for Machine Intelligence (foss/2015.05 CUDA/8.0.44 cuDNN/5.1 Python/2.7.9)2017-07-21T14:56:54Z
terachem1.9xstream.stanford.xsede.orgTeraChem is general purpose quantum chemistry software designed to run on NVIDIA GPU architectures under a 64-bit Linux operating system.2017-07-21T14:56:54Z
tginfo1.1.1maverick.tacc.xsede.orgTeraGrid Usage utility2017-07-21T14:28:46Z
tginfo1.1.1wrangler.tacc.xsede.orgTeraGrid Usage utility2017-07-21T14:46:27Z
tginfo1.1.3maverick.tacc.xsede.orgTeraGrid Usage utility2017-07-21T14:28:46Z
tginfo1.1.3wrangler.tacc.xsede.orgTeraGrid Usage utility2017-07-21T14:46:27Z
tginfo1.1.4supermic.cct-lsu.xsede.orgTeraGrid tgusage utility2017-07-21T14:40:38Z
tgproxy0.9.1maverick.tacc.xsede.orgTeraGrid Proxy utility2017-07-21T14:28:46Z
tgproxy0.9.1stampede.tacc.xsede.orgTeraGrid Proxy utility2017-07-21T14:29:15Z
tgproxy0.9.1wrangler.tacc.xsede.orgTeraGrid Proxy utility2017-07-21T14:46:27Z
tgresid2.3.4maverick.tacc.xsede.orgTeraGrid Resid utility2017-07-21T14:28:46Z
tgresid2.3.4stampede.tacc.xsede.orgTeraGrid Resid utility2017-07-21T14:29:15Z
tgresid2.3.4wrangler.tacc.xsede.orgTeraGrid Resid utility2017-07-21T14:46:27Z
tgusage3.0supermic.cct-lsu.xsede.orgTeraGrid tgusage utility2017-07-21T14:40:38Z
theano0.8.0bridges.psc.xsede.org2017-07-21T15:04:54Z
theano0.8.2bridges.psc.xsede.org2017-07-21T15:04:54Z
tiff4.0.6bridges.psc.xsede.org2017-07-21T15:04:54Z
tmhmm2.0cbridges.psc.xsede.org2017-07-21T15:04:54Z
tophat2.0.10stampede.tacc.xsede.orgTopHat2 is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons.2017-07-21T14:29:15Z
tophat2.0.12supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
tophat2.0.13stampede.tacc.xsede.orgTopHat2 is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons.2017-07-21T14:29:15Z
tophat2.0.8bstampede.tacc.xsede.orgTopHat2 is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons.2017-07-21T14:29:15Z
tophat2.1.0bridges.psc.xsede.orgA splice junction mapper for RNA-Seq reads2017-07-21T15:04:54Z
tophat2.1.1bridges.psc.xsede.orgA splice junction mapper for RNA-Seq reads2017-07-21T15:04:54Z
tophat2.1.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
torch20160414-cbb5161xstream.stanford.xsede.orgTorch is a scientific computing framework with wide support for machine learning algorithms that puts GPUs first.2017-07-21T14:56:54Z
torch20160805-4bfc2daxstream.stanford.xsede.orgTorch is a scientific computing framework with wide support for machine learning algorithms that puts GPUs first.2017-07-21T14:56:54Z
torch5633c24ebridges.psc.xsede.org2017-07-21T15:04:55Z
totalview8.12.1supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
transdecoder3.0.1bridges.psc.xsede.orgTransDecoder identifies candidate coding regions within transcript sequences.2017-07-21T15:04:55Z
transrate1.0.3bridges.psc.xsede.orgSoftware for de-novo transcriptome assembly quality analysis.2017-07-21T15:04:55Z
trilinos11.12.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
trilinos11.14.3stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2017-07-21T14:29:15Z
trilinos12.0.1stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2017-07-21T14:29:15Z
trilinos12.10.1stampede2.tacc.xsede.orgPortable Extendible Toolkit for Scientific Computing, Numerical library for sparse linear algebra2017-07-21T14:56:49Z
trilinos12.2.1stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2017-07-21T14:29:15Z
trilinos12.6.1stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2017-07-21T14:29:15Z
trilinos12.6.4stampede.tacc.xsede.orgA suite of numerical algorithms from Sandia Natl. Labs2017-07-21T14:29:15Z
trimmomatic0.35comet.sdsc.xsede.org2017-07-21T15:01:01Z
trimmomatic0.36bridges.psc.xsede.org2017-07-21T15:04:55Z
trinity2.0.6bridges.psc.xsede.org2017-07-21T15:04:55Z
trinity2.1.1bridges.psc.xsede.org2017-07-21T15:04:55Z
trinity2.1.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
trinity2.2.0bridges.psc.xsede.org2017-07-21T15:04:55Z
trinity2.3.2bridges.psc.xsede.org2017-07-21T15:04:55Z
trinity2.4.0bridges.psc.xsede.org2017-07-21T15:04:55Z
trinityrnaseqr20131110stampede.tacc.xsede.orgPackage for RNA-Seq de novo Assembly2017-07-21T14:29:15Z
trinityrnaseqr20140717stampede.tacc.xsede.orgPackage for RNA-Seq de novo Assembly2017-07-21T14:29:15Z
trinotate2.0.2bridges.psc.xsede.org2017-07-21T15:04:55Z
trinotate_db2.0bridges.psc.xsede.org2017-07-21T15:04:55Z
trinotate_db2.0_pylon1bridges.psc.xsede.org2017-07-21T15:04:55Z
trnascan-se1.23bridges.psc.xsede.orgScan a sequence file for tRNAs using tRNAscan, EufindtRNA and tRNA covariance models2017-07-21T15:04:55Z
uberftp2.6maverick.tacc.xsede.orgTeraGrid Uberftp utility2017-07-21T14:28:46Z
uberftp2.6supermic.cct-lsu.xsede.orgInteractive GridFTP client2017-07-21T14:40:38Z
uberftp2.8bridges.psc.xsede.orgUberFTP GridFTP client2017-07-21T15:04:55Z
uberftp2.8maverick.tacc.xsede.orgTeraGrid Uberftp utility2017-07-21T14:28:46Z
uberftp2.8stampede.tacc.xsede.orgTeraGrid Uberftp utility2017-07-21T14:29:15Z
uberftp2.8stampede2.tacc.xsede.orgTeraGrid Uberftp utility2017-07-21T14:56:49Z
uberftp2.8wrangler.tacc.xsede.orgTeraGrid Uberftp utility2017-07-21T14:46:27Z
udunits2.2.19maverick.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets.2017-07-21T14:28:46Z
udunits2.2.19stampede.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets.2017-07-21T14:29:15Z
udunits2.2.25stampede2.tacc.xsede.orgI/O library which stores and retrieves data in self-describing, machine-independent datasets.2017-07-21T14:56:49Z
ufraw0.22bridges.psc.xsede.org2017-07-21T15:04:55Z
unceqr2016-07-08bridges.psc.xsede.org2017-07-21T15:04:55Z
unicore6.6.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
use.ownnonecomet.sdsc.xsede.org This module file will add \$HOME/privatemodules to the list of directories that the module command will search for modules. Place your own module files here. This module, when loaded, will create this directory if necessary. Version $rkoversion2017-07-21T15:01:01Z
util-linux2.26.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
valgrind3.12.0stampede2.tacc.xsede.orgDynamic memory testing and debugging tools2017-07-21T14:56:49Z
valgrind3.8.1stampede.tacc.xsede.orgDynamic memory testing and debugging tools2017-07-21T14:29:15Z
varscan2.4.2bridges.psc.xsede.org2017-07-21T15:04:55Z
vasp4.6comet.sdsc.xsede.org2017-07-21T15:01:01Z
vasp5.3.5stampede.tacc.xsede.orgVienna Ab-Initio Simulation Package2017-07-21T14:29:15Z
vasp5.4.1stampede.tacc.xsede.orgVienna Ab-Initio Simulation Package2017-07-21T14:29:15Z
vasp5.4.4comet.sdsc.xsede.org2017-07-21T15:01:01Z
vasp5.4.4stampede2.tacc.xsede.orgVienna Ab-Initio Simulation Package2017-07-21T14:56:49Z
vaspvaspbridges.psc.xsede.org2017-07-21T15:04:55Z
vcftools0.1.14comet.sdsc.xsede.org2017-07-21T15:01:01Z
vcftools0.1.15bridges.psc.xsede.orgVCFtools is a program package designed for working with VCF files, such as those generated by the 1000 Genomes Project.2017-07-21T15:04:55Z
velvet1.2.08stampede.tacc.xsede.orgVelvet - Sequence assembler for very short reads2017-07-21T14:29:15Z
velvet1.2.10comet.sdsc.xsede.org2017-07-21T15:01:01Z
velvet1.2.10wrangler.tacc.xsede.orgVelvet - Sequence assembler for very short reads2017-07-21T14:46:27Z
velvet1.2.10-maxk63-bigbridges.psc.xsede.org2017-07-21T15:04:55Z
velvet1.2.10-maxk63-categ14-bigbridges.psc.xsede.org2017-07-21T15:04:55Z
visit2.12.0stampede2.tacc.xsede.orga parallel visualization suite based in part on VTK2017-07-21T14:56:49Z
visit2.7maverick.tacc.xsede.orga parallel visualization suite based in part on VTK2017-07-21T14:28:46Z
visit2.9maverick.tacc.xsede.orga parallel visualization suite based in part on VTK2017-07-21T14:28:46Z
visit2.9stampede.tacc.xsede.orga parallel visualization suite based in part on VTK2017-07-21T14:29:15Z
visit2.9.1comet.sdsc.xsede.org2017-07-21T15:01:01Z
vmatch2.2.2supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
vmd1.9.2bridges.psc.xsede.org2017-07-21T15:04:55Z
vmd1.9.2stampede.tacc.xsede.org2017-07-21T14:29:15Z
vmd1.9.3comet.sdsc.xsede.org2017-07-21T15:01:01Z
vmd1.9.3stampede2.tacc.xsede.org2017-07-21T14:56:49Z
voro++0.4.5stampede.tacc.xsede.orgVoronoi Tesselation code2017-07-21T14:29:16Z
vtk6.1.0maverick.tacc.xsede.organ open-source system for 3D computer graphics, image processing and visualization2017-07-21T14:28:46Z
vtune13.update14stampede.tacc.xsede.orgIntel VTune Amplifier (C/C++/Fortran for x86_64)2017-07-21T14:29:16Z
vtune17.update4stampede2.tacc.xsede.orgIntel VTune Amplifier2017-07-21T14:56:49Z
vtune2015.3.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
vtune2016.3.0bridges.psc.xsede.org2017-07-21T15:04:55Z
weka3.7.12comet.sdsc.xsede.org2017-07-21T15:01:01Z
westpa15acf5d3bridges.psc.xsede.org2017-07-21T15:04:55Z
wgs7.0stampede.tacc.xsede.orgCelera assembler - de novo whole-genome shotgun (WGS) DNA sequence assembler2017-07-21T14:29:15Z
wgs8.2bridges.psc.xsede.org2017-07-21T15:04:55Z
wgs8.3rc2bridges.psc.xsede.org2017-07-21T15:04:55Z
wq264supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
wq272supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
wranglerirods4wrangler.tacc.xsede.orgirods2017-07-21T14:46:27Z
x26420150930xstream.stanford.xsede.org2017-07-21T14:56:54Z
xalt0.6stampede.tacc.xsede.orgCollects system usage data2017-07-21T14:29:16Z
xalt1.5.12maverick.tacc.xsede.orgCollects system usage data2017-07-21T14:28:46Z
xalt1.6maverick.tacc.xsede.orgCollects system usage data2017-07-21T14:28:46Z
xalt1.7stampede2.tacc.xsede.orgCollects system usage data2017-07-21T14:56:49Z
xcb-proto1.11-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
xcb-util0.4.0-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
xcb-util-image0.4.0-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
xcb-util-keysyms0.4.0-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
xcb-util-renderutil0.3.9-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
xcb-util-wm0.4.1-Python-2.7.9xstream.stanford.xsede.org2017-07-21T14:56:54Z
xdinfo1.3-1maverick.tacc.xsede.org2017-07-21T14:28:46Z
xdinfo1.3-1stampede.tacc.xsede.org2017-07-21T14:29:15Z
xdinfo1.3-1stampede2.tacc.xsede.org2017-07-21T14:56:49Z
xdinfo1.3-1supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
xdinfo1.3-1wrangler.tacc.xsede.org2017-07-21T14:46:27Z
xdinfo1.3-2bridges.psc.xsede.orgXSEDE xdinfo client2017-07-21T15:04:55Z
xdresourceid1.0comet.sdsc.xsede.org2017-07-21T15:01:01Z
xdresourceid1.0maverick.tacc.xsede.org2017-07-21T14:28:46Z
xdresourceid1.0stampede.tacc.xsede.org2017-07-21T14:29:15Z
xdresourceid1.0stampede2.tacc.xsede.org2017-07-21T14:56:49Z
xdresourceid1.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
xdresourceid1.0wrangler.tacc.xsede.org2017-07-21T14:46:27Z
xdresourceid1.0-2bridges.psc.xsede.orgXSEDE Resource ID client2017-07-21T15:04:55Z
xdusage1.1-2supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
xdusage2.0maverick.tacc.xsede.orgXSede Usage utility2017-07-21T14:28:46Z
xdusage2.0stampede.tacc.xsede.orgXSede Usage utility2017-07-21T14:29:15Z
xdusage2.0stampede2.tacc.xsede.orgXSede Usage utility2017-07-21T14:56:49Z
xdusage2.0wrangler.tacc.xsede.orgXSede Usage utility2017-07-21T14:46:27Z
xdusage2.0-3bridges.psc.xsede.orgadds XSEDE xdusage tool to paths in the login shell environment2017-07-21T15:04:55Z
xdusage2.0-3supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
xextproto7.3.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
xhmm1.0bridges.psc.xsede.orgxhmm uses principal component analysis (PCA) normalization and a hidden Markov model (HMM) to detect and genotype copy number variation (CNV) from normalized read-depth data from targeted sequencing experiments.2017-07-21T15:04:55Z
xineramaproto1.2.1xstream.stanford.xsede.org2017-07-21T14:56:54Z
xorg-macros1.19.0xstream.stanford.xsede.org2017-07-21T14:56:54Z
xproto7.0.28xstream.stanford.xsede.org2017-07-21T14:56:54Z
xsede1.0supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
xsede1.1supermic.cct-lsu.xsede.org2017-07-21T14:40:38Z
xtrans1.3.5xstream.stanford.xsede.org2017-07-21T14:56:54Z
zlib1.2.8bridges.psc.xsede.org2017-07-21T15:04:55Z
zlib1.2.8stampede.tacc.xsede.orgGeneral purpose compression library: %{ZLIB_VERSION}.2017-07-21T14:29:15Z
zlib1.2.8xstream.stanford.xsede.org2017-07-21T14:56:54Z